Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0498 ATGCAAATGCCACCACAGGTTATGATTAGCAACTATGCTGGTATACCTTGCCGCTACACCAGTCCATTACAAGGACTAAAGAAGTACATTTCTTCAGTGACTTATGCACCTGGTTGTAGCAATGTTAAATGCAGCGATCAGAGCCTTATTGCAGCAGCAACTGAGGCAGCAGCAAGTGCTGATGTAGTGGTGGTGGTTGTGGGATTGGACCAATCAATTGAAGCAGAAGGCCTGGACCGAGAGAACTTGACATTACCTGGATTTCAAGAAAAGCTTGTGAAAGATGTGGCTCAAGCTACCAAAGGAACAGTGATTTTAGTCACAATGGCAGCTGGTCCAATTGACATTTCTTTCACTAAAAGTGTTAGTAACATAGGAGCGATATTGTGGGTAGGATATCCTGGTCAAGCTGGGGGAGATGCAATAGCCCAAGTGATATTTGGAGACTACAACCCGGGTGGTAGGTCCCCTTTCACATGGTATCCACAATCATATGTTGATCAAGTACCTATGACAGACATGAACATGAGAGCCAACAGCAGTAGAAATTACCCTGGGAGAACCTACAGGTTTTACAATGGGAGTACCCTCTATGAATTTGGGCATGGACTAAGCTACTCCACATTCTCCACCTATATAGCATCTGCTCCCTCCACCATAGTGATCCAGAACTCATCCATTTCTGACTCACATAATAACATTATCTTCTCATCCAACTCAGGCACCAAACTCATGTCCCTTTCTGATGGCCAAACAATTGATATTTCCACCTTAAGTTGCCTTGACTTGACATTCTTGCTTATCATTGGTGTGAAGAACAATGGACCCCTTGATGGATCTCATGTGGTGCTAGTGTTCTGGGAGCCAACAATTTCAGACCTTGTGACTGGGGCTCCAATTAAGCAGTTGATTGGATTTGAAAGAGTACAGGTTAAGGTAGGGGTGACAGAATTTGTGACAGTTAAAATAGATCTATGCCAACAGCTAACAGTTGTGGATAGTGATGGCAAAAGAAAGCTGATCATTGGACAGAACACCATTCTGGTTGGTTCTTCCAATGAAAACCAGGTGACACACAACATTGATGTTAAGCTTTCAGGGAGTGTGGATGAAGAACACTTCAAGTCTGACTGA 1134 0.4356 MQMPPQVMISNYAGIPCRYTSPLQGLKKYISSVTYAPGCSNVKCSDQSLIAAATEAAASADVVVVVVGLDQSIEAEGLDRENLTLPGFQEKLVKDVAQATKGTVILVTMAAGPIDISFTKSVSNIGAILWVGYPGQAGGDAIAQVIFGDYNPGGRSPFTWYPQSYVDQVPMTDMNMRANSSRNYPGRTYRFYNGSTLYEFGHGLSYSTFSTYIASAPSTIVIQNSSISDSHNNIIFSSNSGTKLMSLSDGQTIDISTLSCLDLTFLLIIGVKNNGPLDGSHVVLVFWEPTISDLVTGAPIKQLIGFERVQVKVGVTEFVTVKIDLCQQLTVVDSDGKRKLIIGQNTILVGSSNENQVTHNIDVKLSGSVDEEHFKSD* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0498 377 Pfam Glycosyl hydrolase family 3 C-terminal domain 8 206 IPR002772 GO:0004553|GO:0005975
Dod06g0498 377 PANTHER BETA-D-XYLOSIDASE 5-RELATED 6 361 - -
Dod06g0498 377 Gene3D - 4 208 IPR036881 GO:0004553|GO:0005975
Dod06g0498 377 Pfam Fibronectin type III-like domain 281 352 IPR026891 -
Dod06g0498 377 Gene3D Immunoglobulins 261 373 IPR013783 -
Dod06g0498 377 PANTHER SUGAR HYDROLASE-RELATED 6 361 IPR044993 GO:0009044|GO:0045493
Dod06g0498 377 SMART Fn3_like_2 281 353 IPR026891 -
Dod06g0498 377 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 10 209 IPR036881 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0498 Dod-Chr6 6064091 6065341 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0498 6 367 Glycoside Hydrolase AT3G19620 57.104 9.19e-152 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0498 K15920 - gmx:100817869 595.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0498 06 6064091 6065341 Dod06g0498 06 6064091 6065341 ECH