Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0491 ATGGCATCGTCTTTCTTATTACCGCTCTCTGCCCCTTTCATAGACGATTCCGCAGCTTCTTCTCTGCGCCCCAACTCCTCTTCCTTCTTCCATGGAACCAAGCTGTTTCCTTGTGCGAGGGCCAGAGTGCCACGGAGAAGGTGCTTCAAGCCTCCTTCTGCCTCCCTCGACCACATCCCCAAGCAGTTCAGGCAGGAAAATCTCAAGGATGGATTGATGGAGAACTACAAGAATACACCTAAACATCTATATGGCCTTACACCTTCACAAATGGACATGTTCATGACAGAAGATAATCCTATCCGCCAGCAGTCTGAAAGAGTTACAGAGGAAAGCATATCATCTGCTACAAATTATTTGGATCATGGTGGGATGTGGACTCTGTCTGGCTTGGGAGATAAGGGCCCTTCAAAATACAGTATGAGTGTCAGTATGTATCGAGGAGGAGGTAGGGGAAGTGGAAGGCCTAGAACTGCTCCACCAGATCTGCCTTCTTTACTCTTGGATGCTCGGATATGCTATCTGGGTATGCCGATTGTACCAGCTGTGACAGAACTTCTTGTTGCCCAACTTATGTGGTTGGATTATGATAACCCTAACAAACCTATATACTTATATATTAATTCATCAGGGACTCAGAATGAAAAGAATGAGACCGTAGGATCAGAAACTGAGGCATATTCCATAGCTGATATGATGTCTTATGTCAAATCGGATGTCTATACTGTGAACTGTGGCATGGCATATGGTCAAGCAGCAATGCTTCTGTCACTTGGAACGAAGGGTTATCGTGCTGTACAGCCAAATTCATCTACAAAATTATATCTACCAAAAGTCAACAGATCAAGTGGTGCTGTTATAGATATGTGGATCAAGGCAAAAGAGCTGGATGCAAATACAGAGTCATACATCGAACTATTGGCGAAAGGAATAGGGAAACCAAAGGAAGAAATTGCTAAAGAAGTCCAGAGGCCTAAATATTTCCGAGCACAGGAAGCCATAGACTACGGTGTTGCCGACAAAATAATCGATTCGAGGGACATTGCATTTGACAAGCGGAATTATGATGAAATGCTTGCTCAATCAAGAGCTATGAGGAGACAAGCTGGCGGCAATCCTCAAGTGGCTCCTTCGGGATTTAGGTGA 1146 0.4459 MASSFLLPLSAPFIDDSAASSLRPNSSSFFHGTKLFPCARARVPRRRCFKPPSASLDHIPKQFRQENLKDGLMENYKNTPKHLYGLTPSQMDMFMTEDNPIRQQSERVTEESISSATNYLDHGGMWTLSGLGDKGPSKYSMSVSMYRGGGRGSGRPRTAPPDLPSLLLDARICYLGMPIVPAVTELLVAQLMWLDYDNPNKPIYLYINSSGTQNEKNETVGSETEAYSIADMMSYVKSDVYTVNCGMAYGQAAMLLSLGTKGYRAVQPNSSTKLYLPKVNRSSGAVIDMWIKAKELDANTESYIELLAKGIGKPKEEIAKEVQRPKYFRAQEAIDYGVADKIIDSRDIAFDKRNYDEMLAQSRAMRRQAGGNPQVAPSGFR* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0491 381 SUPERFAMILY ClpP/crotonase 157 348 IPR029045 -
Dod06g0491 381 Gene3D - 151 351 - -
Dod06g0491 381 CDD S14_ClpP_2 162 342 IPR001907 GO:0004176|GO:0004252|GO:0006508
Dod06g0491 381 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT-RELATED PROTEIN 1, CHLOROPLASTIC 48 373 - -
Dod06g0491 381 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 48 373 IPR023562 -
Dod06g0491 381 Pfam Clp protease 164 345 IPR023562 -
Dod06g0491 381 PRINTS Clp protease catalytic subunit P signature 162 177 IPR001907 GO:0004176|GO:0004252|GO:0006508
Dod06g0491 381 PRINTS Clp protease catalytic subunit P signature 242 259 IPR001907 GO:0004176|GO:0004252|GO:0006508
Dod06g0491 381 PRINTS Clp protease catalytic subunit P signature 202 222 IPR001907 GO:0004176|GO:0004252|GO:0006508
Dod06g0491 381 PRINTS Clp protease catalytic subunit P signature 321 340 IPR001907 GO:0004176|GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0491 Dod-Chr6 6003110 6007882 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0491 K01358 - jre:109014211 612.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0491 06 6003110 6007882 Dod06g0491 06 6003110 6007882 ECH