Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0321 ATGGAAATCGAGGTGGTGAGCCTGGACGAGCTCCCTTCGGCTCTTCTGGCCACCATCATGACCAAGCTTGACATCGCTTCCATCTGCTCCTTGGCCTCCACATCCTCCACCTTCCGCTCCTGTGCCCGACACATCCTCTCTTTCCTCCCCACTTTCCACATCCTCGACATTGCGCCTTCTGGGGAGTTGCTTAGGCCGTTGCTGCCACCAAATCCTTACCTTAAGAGCCTCAAGGTTGATTGTGGTCGGCTTGATGATTCTGCTATAGCCCATCTTGTGAAACCCTCGCTGCATGAGCTTTGCTTGCACAATTGTGCTGATTTCAGTGGGAAACTGCTCTCTGAGATTGGGACCCGCTGCAAGGACCTAAGGTCTCTCTACTTGGGTTCGGTAGCAGAAAAAAGAGGGAGGGCCATTCATATTTCTGATCTGGAGGAGTTACTCAGCGGCTGCTCCCAGTTGGAAGCACTGATTCTGATGTTTGATGTTTCTCTCTTTCTACGTCATAACTTTGCTCGAGTATGGGCTTCTGCCTCAGAGAAACTCACTTCTCTTGAAATTGGCTACATTTCTTCTGTTACATTGACCGAACTGCTTAGCCCAAATTTGGGATCTCATCAGTCCTTAAATCCTGTTCAACCATCCATACTGCCTAGAATTCAGAAACTATCCCTCTCAGTAGACTATATAACGGATGCTATGGTTGGTACGATATCCAAAGGTCTCATCTTTTTGACCCATTTGGATCTTCGAGATGCACCAGTCATTGAACCAAGAATTACTTTTGATCTAACCAATGCTGGCCTTCAGCAAATTAATCAACTTGGGAGATTGAAACATCTTTCATTGGTCCGAAGCCAAGAATGTCTAATTACTTACTTTCGAAGAGTGAATGATCTAGGATTACTTCTAATGGCTGACAAGTGTGCAAACATGGAGAGCATATGGCTTGGTGGCTTCTGTCGTGTCACTGACACTGGCTTCAAAACCATCCTTCATTCGTGCTCTCACTTATACAAGCTTAAGGTCACTTATGGGACTCAGTTAACTGATCTAGTTTTTCATGATATATCTGCAACATCCCTTTCCTTAACACATGTGAGCTTAAGGTGGTGCAATCTGTTGACCAACCATGCTGTATTGAGTTTGGCATCAAACAAGGAGCTTAAAGTTCTTGACCTGAGAGATTGCAGGAGCTTAGGCGATGAAGCTCTCAGGGCCATTGGCACTCTTCCAAGACTGAAAATGTTACTATTAGATGGCTCTGATATAACGGATACAGGACTTTCTTATTTAAGACCATGTGTTATTAATTCACTGTACGCATTATCTGTTCGAGGGTGCAAAAGACTAACAGATAAATGCATCACGGTCCTCTTTGATGGCTGTGTGATGCTGGAATTGCGAGAACTGGACCTGTCTAATATCCCTAACCTATCAGATGCTGGAGTTCTGCTGCTGGCAAAATGTCGGATTCCCCTTTTTGAACTCCGGATGCGACAGTGCCCTCTAATTGGTGATACTTCAATCATGGCATTAGCTTCAATGCAGGTGGATGAGGCCGGATGGCGAGGAAGTAGTTTGCGCTTGTTGGATCTTTATAACTGTGGTGGCATTACACAGCTAGCATTTCGGTGGTTAAAGAAACCATATTTTCCAAGGCTTAAATGGTTGGGGGTGACTGGCAGTGTTAATAGGGATATGGTAGACGCTTTAGCTAGAAGTAGACCCTTCTTGCATGTGGCATGCCATGGCGAGGAGCTTGGGGCTGACCCCTATGATATCTCAGATGGTTTATACGCGTACGATTATGACGAGGTGGATGAGTTTGAGCGGTGGCTTCTCGAAGCTGATGTTGATAGTGACGATGAAGAAATGGGTGATGCTGAAAATAATGAAGAACCTGTTGTTTAA 1914 0.454 MEIEVVSLDELPSALLATIMTKLDIASICSLASTSSTFRSCARHILSFLPTFHILDIAPSGELLRPLLPPNPYLKSLKVDCGRLDDSAIAHLVKPSLHELCLHNCADFSGKLLSEIGTRCKDLRSLYLGSVAEKRGRAIHISDLEELLSGCSQLEALILMFDVSLFLRHNFARVWASASEKLTSLEIGYISSVTLTELLSPNLGSHQSLNPVQPSILPRIQKLSLSVDYITDAMVGTISKGLIFLTHLDLRDAPVIEPRITFDLTNAGLQQINQLGRLKHLSLVRSQECLITYFRRVNDLGLLLMADKCANMESIWLGGFCRVTDTGFKTILHSCSHLYKLKVTYGTQLTDLVFHDISATSLSLTHVSLRWCNLLTNHAVLSLASNKELKVLDLRDCRSLGDEALRAIGTLPRLKMLLLDGSDITDTGLSYLRPCVINSLYALSVRGCKRLTDKCITVLFDGCVMLELRELDLSNIPNLSDAGVLLLAKCRIPLFELRMRQCPLIGDTSIMALASMQVDEAGWRGSSLRLLDLYNCGGITQLAFRWLKKPYFPRLKWLGVTGSVNRDMVDALARSRPFLHVACHGEELGADPYDISDGLYAYDYDEVDEFERWLLEADVDSDDEEMGDAENNEEPVV* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0321 637 Pfam F-box domain 8 45 IPR001810 GO:0005515
Dod06g0321 637 Pfam Leucine Rich repeat 386 408 IPR001611 GO:0005515
Dod06g0321 637 Gene3D Ribonuclease Inhibitor 7 433 IPR032675 -
Dod06g0321 637 PANTHER UNCHARACTERIZED 11 559 - -
Dod06g0321 637 PANTHER RNI-LIKE SUPERFAMILY PROTEIN-RELATED 11 559 - -
Dod06g0321 637 SUPERFAMILY RNI-like 60 285 - -
Dod06g0321 637 SMART LRR_CC_2 525 550 IPR006553 -
Dod06g0321 637 SMART LRR_CC_2 465 490 IPR006553 -
Dod06g0321 637 SMART LRR_CC_2 94 119 IPR006553 -
Dod06g0321 637 SMART LRR_CC_2 309 334 IPR006553 -
Dod06g0321 637 SMART LRR_CC_2 361 386 IPR006553 -
Dod06g0321 637 SMART LRR_CC_2 387 411 IPR006553 -
Dod06g0321 637 SMART LRR_CC_2 437 462 IPR006553 -
Dod06g0321 637 SMART LRR_CC_2 491 516 IPR006553 -
Dod06g0321 637 SUPERFAMILY F-box domain 4 44 IPR036047 GO:0005515
Dod06g0321 637 Gene3D Ribonuclease Inhibitor 437 580 IPR032675 -
Dod06g0321 637 SUPERFAMILY RNI-like 298 562 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0321 - - pvu:PHAVU_007G016400g 1093.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0321 06 4531999 4535303 Dod06g0321 06 4531999 4535303 ECH