Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0316 ATGGTTGGGCACATTGTGGGGCTTGGTGACCGGCATGGTGAAAACATTCTTTTTTATTCTACCAGCGGTGATTTTGTTCATGTTGATTTTAGCTGCTTATTTGACAAAGATTTGCAGTTGGAGAAGGCCGAGCTTGTTCCTTTCAAGCTAACCCAGAACATGATTGATGGCTTAGGCATCACTGGATATGAGGGTTTCTTCTTGAGGGTTTGTGAAATTACACTTTATGTACTGAAGACACACAGGGAAACTCTTATGAGCGTTCATGAAACTTTCATCCATGATCCTCTCGTGGAATGGACAAAATCTCACAAGTCCAGTGGAATAGAAGTTCAAAATCCACACGCACAGCAAGCAAAGGAAGGTGTAGTTCAAGGTGATCCCTTTTTGGTCAAAGGGCGCCGTGGATTGCAGGCCACTGCAGCTGAAAGTGCAAGATACCGTGGTATGGCGGCAGCTGAGGTTAGGTTGGGGAGGAAGAAGAAGAAAAAGGATGAGGAGGAGGTGATTAAGATGGAGAGAGTTTCGGGTTGGTGA 537 0.4525 MVGHIVGLGDRHGENILFYSTSGDFVHVDFSCLFDKDLQLEKAELVPFKLTQNMIDGLGITGYEGFFLRVCEITLYVLKTHRETLMSVHETFIHDPLVEWTKSHKSSGIEVQNPHAQQAKEGVVQGDPFLVKGRRGLQATAAESARYRGMAAAEVRLGRKKKKKDEEEVIKMERVSGW* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0316 178 Gene3D - 1 125 IPR036940 GO:0016301
Dod06g0316 178 Pfam Phosphatidylinositol 3- and 4-kinase 1 101 IPR000403 -
Dod06g0316 178 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 1 146 IPR000403 -
Dod06g0316 178 PANTHER ATAXIA TELANGIECTASIA MUTATED ATM -RELATED 1 123 - -
Dod06g0316 178 SUPERFAMILY Protein kinase-like (PK-like) 1 104 IPR011009 -
Dod06g0316 178 SMART pi3k_hr1_6 1 143 IPR000403 -
Dod06g0316 178 PANTHER SERINE/THREONINE-PROTEIN KINASE ATR 1 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0316 Dod-Chr6 4412046 4415026 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0316 K06640 - ath:AT5G40820 226.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0316 06 4412046 4415026 Dod06g0316 06 4412046 4415026 ECH