Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0302 ATGAACAAGAGGCCCAGAGCCGCCATCGACAAGCCCCTTCTCGATCTCTGCAATCGAGAGCTCGGCCAGCTTTCCGCCAGAAATTTCGCTCACCGTCTCGGCGCCTCCGAGGATCTTGTACTTCGGCTTGATGTACTCAGGAAGCTGGAAAAGCACAGAGGTTGTGTGAACACTGTGAGCTTCAATGCTGATGGTGACATTTTGGTGTCGGGTTCCGATGACCGGAGGGTCATTCTCTGGGACTGGGAAACTGGGCGTATTAAGCTGTCTTTCCATTCTGGTCACAGTAACAATGTTTTCCAGGCCAAAATCATGCCCCACTCCGATGATCGCAGCATTGTCACTTGTGCTGCTGATGGGCAGGTGAGACAAGCTCAAATTCGTGAAAAGGGAGGAGTGGAAACTAAGTTGCTGGCGAAGCATCAAGGACGGGCTCATAAGTTGGCTATTGAGCCTGGTAGCCCTCATATATTTTATACCTGCGGTGAAGATGGATTAGTACAGCATTTTGATTTGAGAACTGGCACGGGAACAGAACTTTTTACGTGTCAGCCAATTAAGGATAGATGGAATTACATGCCAGTCATCCATCTTAATGCAATTGCAATTGATCCAAGGAACCCAAATCTCTTTGCAGTTGCTGGGTCTGATGAGTATACTCGACTTTATGATATTCGCAAATATAAGTGGGATGGATCATCTGATTTTGGTCAACCTACTAATTTCTTTTGCCCTCCTCACTTGATTGGTGATGAGCGAGTTGGAATAACAGGCTTGGCCTTTTCTGAACAAAGAGAGCTACTTGTATCATACAATGATGAGTATATTTACCTTTTTACACAAGATATGGGCTTGGGACCTAACCCTGTTCCTGGGTCCCCTGGATCTATGAGCAGTGATGCAAGTGAAATGGGAGGTAGTCATGGCTCTGCAGGATCTCCGTCAAACATGGATGCCGATGAGAAAATCACTCCACAAGTTTATAAGGGACACAGGAATTGTGAGACAGTGAAGGGTGTCAACTTTTTTGGACCTAAATGTGAATATGTGGTGAGTGGGTCAGACTGTGGCCGGATTTTCATTTGGAGGAAAAAAGATGGCCAGCTTATTCGTGTCATGGCAGCAGATAAGCATGTTGTGAACTGCATTGAGTCTCATCCTCACACAATGGTTCTTGCAAGCAGTGGAATTGAGCATGATATAAAGATGTGGACTCCAAAGGCCCATGAGAAAGCTACTTTGCCCAAAAATATTGAGCAGGTTGTCTTGTTTGATCCAATTCCTTGGTTTACAATTGATGGTGATGATACTGACGATGATGGCAATTATGATGATGATATGTCCGATGATGACTATGATGATGATGATGATGATGAAATGTTTGACGACGACAACGATGATATTGATGATGACGACGATGACGATGATGATGATGGCTGCGGCGGCGATGATGATTATGACGATTGTGAGGATGGTGATTATTCTGATGGTTGCGATGATGATGACAACGATGGTGGTGTTGAGGATGATAATAATGATGACAATGGCAATGATGATAATTTTGCTGGTGGTTGTAATGATGCCAATTGA 1590 0.4465 MNKRPRAAIDKPLLDLCNRELGQLSARNFAHRLGASEDLVLRLDVLRKLEKHRGCVNTVSFNADGDILVSGSDDRRVILWDWETGRIKLSFHSGHSNNVFQAKIMPHSDDRSIVTCAADGQVRQAQIREKGGVETKLLAKHQGRAHKLAIEPGSPHIFYTCGEDGLVQHFDLRTGTGTELFTCQPIKDRWNYMPVIHLNAIAIDPRNPNLFAVAGSDEYTRLYDIRKYKWDGSSDFGQPTNFFCPPHLIGDERVGITGLAFSEQRELLVSYNDEYIYLFTQDMGLGPNPVPGSPGSMSSDASEMGGSHGSAGSPSNMDADEKITPQVYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWRKKDGQLIRVMAADKHVVNCIESHPHTMVLASSGIEHDIKMWTPKAHEKATLPKNIEQVVLFDPIPWFTIDGDDTDDDGNYDDDMSDDDYDDDDDDEMFDDDNDDIDDDDDDDDDDGCGGDDDYDDCEDGDYSDGCDDDDNDGGVEDDNNDDNGNDDNFAGGCNDAN* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0302 529 MobiDBLite consensus disorder prediction 288 318 - -
Dod06g0302 529 PANTHER WD REPEAT DOMAIN-CONTAINING FAMILY 8 420 IPR045151 -
Dod06g0302 529 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 49 86 - -
Dod06g0302 529 SMART WD40_4 241 280 IPR001680 GO:0005515
Dod06g0302 529 SMART WD40_4 366 405 IPR001680 GO:0005515
Dod06g0302 529 SMART WD40_4 321 363 IPR001680 GO:0005515
Dod06g0302 529 SMART WD40_4 42 81 IPR001680 GO:0005515
Dod06g0302 529 SMART WD40_4 131 171 IPR001680 GO:0005515
Dod06g0302 529 SMART WD40_4 84 126 IPR001680 GO:0005515
Dod06g0302 529 SMART WD40_4 176 224 IPR001680 GO:0005515
Dod06g0302 529 ProSiteProfiles Trp-Asp (WD) repeats profile. 49 90 IPR001680 GO:0005515
Dod06g0302 529 SUPERFAMILY WD40 repeat-like 41 404 IPR036322 GO:0005515
Dod06g0302 529 MobiDBLite consensus disorder prediction 433 516 - -
Dod06g0302 529 MobiDBLite consensus disorder prediction 433 529 - -
Dod06g0302 529 Pfam WD domain, G-beta repeat 46 81 IPR001680 GO:0005515
Dod06g0302 529 Pfam WD domain, G-beta repeat 326 362 IPR001680 GO:0005515
Dod06g0302 529 MobiDBLite consensus disorder prediction 292 318 - -
Dod06g0302 529 PANTHER WD40/YVTN REPEAT-LIKE-CONTAINING DOMAIN-CONTAINING PROTEIN-RELATED 8 420 - -
Dod06g0302 529 Gene3D - 37 407 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0302 Dod-Chr6 4027509 4032402 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0302 K11804 - gmx:100794236 757.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0302 06 4027509 4032402 Dod06g0302 06 4027509 4032402 ECH