Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0296 ATGTCACATGAAATGGAGTCCAATGCTGCTGAATACGTGGCTCTAGGAGAAGGTTCTAATCCCAAGTTAGACGACAACTTCCATAAGGTTTCAATTATACCTCTCACCTTCTTGATCTTTTATGAGGTCTCAGGAGGACCTTTTGGCGTGGAAGACACAGTAGGAGCAGCTGGGCCATTATTGGCTCTCCTTGGTTTCTTGGTCTTCCCATTCATATGGAGTGTTCCTGAGGCACTAATAACTGCTGAAATGGGCACCATGTTCCCAGAGAATGGTGGCTATGTGGTTTGGGTTTCATCTGCATTGGGACCTTACTGGGGTTTTCAATTGGGTTGGATGAAATGGCTAAGTGGGGTCATTGACAATGCTCTATACCCAGTTTTATTTTTGGATTACCTGAAATCAGCTATCCCAGCTTTGGGAGGTGGTATTCCAAGGATCATAGCAGTGCTAGTTTTGACTTTGGCTCTCACTTACATGAACTATAGGGGCTTAACCTTAGTGGGTTGGGTTGCTATACTACTAGGAATCTTTTCATTACTTCCTTTCATGGTTATGGGAATTATAGCAATTCCCAGGATGAAGCCAGCCAGGTGGCTCATGGTGGATATGAACAAGGTGAACTGGGGTCTATACTTGAACACTCTCTTCTGGAATTTGAACTACTGGGACTCAATTAGTACCCTTGCTGGAGAGGTGGATGATCCTGGTAAAACTCTTCCAAGAGCTCTTTTCTATGCTGGATTGTTGGTTGTTTTGGGGTACTTTTTCCCTGTTCTGATAGGCACCGGAGCTATTCCGGTTGGTCGTGAACTATGGTCTGATGGTTACTTCTCAGAAGCTGCTAGAGTAATTGGAGGTGTTTGGTTAAGATCATGGGTGCAAGCAGCATCTGCTTTGTCAAACATGGGAATGTTTGTGGCTGAGATGAGCAGTGACTCCTTCCAGCTTCTGGGGATGGCAGAAAGGGGCATGCTTCCTGAGTTCTTTGCTAAAAGGTCGCGTTATGGGACGCCTCTTATTGGCATTCTGTTCTCTGCTTCTGGTGTGATCCTGCTTTCATGGTTGAGCTTCCAAGAGATAGTTGCTGCAGAGAACTTCCTGTACTGCTTTGGGATGCTTATGGAGTTTGTAGCATTTGTCAAGTTAAGAATGAAATTCCCAGCTCTTTCTCGGCCTTATAGAGTACCTGTTGGGAGCACAGGAGCAATATTGATGTGTATGCTACCAACAATGCTAATATTTGTGGTTCTTGTTCTTGCTTCTCTCAAGGTCTTCATTATAAGCATCTCAGCTGTGGTGATGGGGCTCTTCTTGCGGCCTTGTTTGAAGTATATGGAGCACAAAAGATGGTTTCAGTTCTCTGTTAATTCCGATCTTCCAGATATTAATACAGCCTAG 1401 0.4454 MSHEMESNAAEYVALGEGSNPKLDDNFHKVSIIPLTFLIFYEVSGGPFGVEDTVGAAGPLLALLGFLVFPFIWSVPEALITAEMGTMFPENGGYVVWVSSALGPYWGFQLGWMKWLSGVIDNALYPVLFLDYLKSAIPALGGGIPRIIAVLVLTLALTYMNYRGLTLVGWVAILLGIFSLLPFMVMGIIAIPRMKPARWLMVDMNKVNWGLYLNTLFWNLNYWDSISTLAGEVDDPGKTLPRALFYAGLLVVLGYFFPVLIGTGAIPVGRELWSDGYFSEAARVIGGVWLRSWVQAASALSNMGMFVAEMSSDSFQLLGMAERGMLPEFFAKRSRYGTPLIGILFSASGVILLSWLSFQEIVAAENFLYCFGMLMEFVAFVKLRMKFPALSRPYRVPVGSTGAILMCMLPTMLIFVVLVLASLKVFIISISAVVMGLFLRPCLKYMEHKRWFQFSVNSDLPDINTA* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0296 466 PIRSF AA_transporter 28 465 - -
Dod06g0296 466 Pfam Amino acid permease 36 433 IPR002293 GO:0016020|GO:0022857|GO:0055085
Dod06g0296 466 PANTHER ACID PERMEASE FAMILY PROTEIN, PUTATIVE, EXPRESSED-RELATED 5 465 - -
Dod06g0296 466 Gene3D Amino acid/polyamine transporter I 30 458 - -
Dod06g0296 466 PANTHER POLYAMINE TRANSPORTER PUT1 5 465 IPR044566 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0296 Dod-Chr6 3989717 3991621 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0296 4 465 Organic Solute Cotransporters AT1G31830 70.386 0.0 700
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0296 - - gmx:100806830 809.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0296 06 3989717 3991621 Dod06g0296 06 3989717 3991621 ECH