Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0282 ATGGGAGTTCAGCAACGCGAAGCACTTCCTGAAGACAATGAGACTGCTGGAAATGCTTGTGCCAGTGGTTCATCCAATCAAGGGGATGTTGTGAGTGTGTCTGCTGTTAGAAATCCAAGTGTAAATGCTGAAAGCAGTGAAGTCGACGGACCTGGTGGCATTTCTTGCAAGAAAAATGATGCCCCACATATCTATAGACAAGATGTTGTGAAGAATATTACCAATGGAATGATAGGGATTGTGACAGAAGTTGTTGGTGATTCGGATTCAGATTCAGATAGCAGCATTACTGACGATGAGGATGATAGTGAGGATGAGGGTGGTGATGTTGAGGAAGGCAATGGTGATGACAGTAATAATGCTAGCAGAAATTCTGATAGGAATGGTACTGATAGGCATTGTAAAACTGATGCTCTTCTTCCTGACCAGCTTCGTGTACTCTGGATGGATGAATCTGAATCCACTCAAAATTTCAGTGACATAGAAGTTGTTGATCGTGGATTTTTACATGGGGATTTCATTGCTTCCGCTTCAGACCCCACTGGTCAAGTGGGTGTAGTGGTTGATGTGAATATAACTGTGGATCTGCTGGCCCCTGATGGATCTTTGATAAAAGAGGTCTCATCAAAAAACTTGAAGCGTATTAGGGACTTCACTGTTGGTGATTATGTGGTGCTTGGTCCCTGGCTAGGCAGAATTGATGATGTTTTGGATAATGTGACTGTCCTATTTGATGATGGTTCAGTGTGTAAAGTCACCAAAGCAGATCCTTTGAATCTTAAACCTGTTTCTAAGAATATCCTTGAAGATGGTCATTTCCCTTATTATCCAGGGCAACGTGTAAGGGCCAGCTCTTCATCAGTTTTCAAGAATTCAAGATGGCTGTCTGGCTTGTGGAAAGCTAACAGGTTGGAAGGTACCGTTACTAAGGTTACAGTAGGGTCAGTCTTTGTTTATTGGATAGCATCGGCAGGTTATGGGCCATATTCTTCTACTGCCCCGGCTGAAGAGCAAAGTCCAAGAAACTTGAAATTGTTGTCTTGTTTCGCTCATGCAAATTGGCAGTTGGGTGATTGGTGCCTTTTACCCTCATCAGCACTGCCATCATCAATTTCCATGGAGAAAGGCATACTAAAGATGGAACGTAATGATCCTATTAACGAATTAGATTCTAATCAGACAGGAAGTGGGTGTGATTCAGAAGAAGCTGCAGTTGAGGAATCAAATGGGAGTAAGAATGCTATGGACCTTGATCCAGTGGATGCCCTGGATGATGGAAATGTTGTAAGTAATCCTTCACACGATTCTAGTTCTTGTGGCAGTTCCATCTCAGTAGCAAAGGACCCTGTCCATGAGAGTTGGCCTCTTCACCGGAAGAAAATAAGGAAAGTTGTCATTAGGAAAGAAAAGAGGGCCCGAAAGAAAGAGGAAATTTTTGAGAAAGCTCTTTTGATTGCTAATACAAAGACACAAGTTGATGTTGCATGGCAGGATGGAACAATAGAGCGGGGAATACATTCCACGACTTTAATTCCTGTAGATAATCCTGGTGATCATGAATTTGTTTCCGAACAATATGTAATAGAGAAGACCTCTGATGATGGTGAGGATACGTGTGAAGGTAGGCGTGTTGGGGTGGTGAGAAGCGTTATTGCCAAGGAGCGAACTGCTTGTGTAAGGTGGTTAAAACCAGTTGAGCGAGCAGAAGATCCTCGAGAGTTTGGCAAGGAGGAAATTGTAAGTGTGTATGAGCTAGAGGGCCACCCAGATTATGATTATTGCTATGGGGATGTGGTTGTTCGGCTGTCACCTGTGTCTGTCTGTCCAGAAACAGATTCTGTTGGAGAGTCCACTGAGAAATCAGTGCAGAGAAATGATGAATGTGGGAGTAAGATGGAAACAAAAAGCCGAACAGGTGCCAGTAAAGCAGAAAATGCAGCTGGTGGTGAAACTTGTGCAGAGTTCTCCGACCTCTCTTGGGTTGGAAATATAACTGGTCTTAAGAACGGTGATATTGAAGTTACTTGGGCTGATGGGATGGTGTCGACGGTTGGACCCCAAGCAATATATGTTGTTGGTCGAGATGATGATGATGAATCAATTGTTGCAGGGAGCGAACTAAGCGATGCTGCAAGCTGGGAAACTGTTAATGATGATGAAATGGAAGTCCTTGAGGACTCCAAAGAGGATATTGAGAGGGGAAATTCAAGCAGCGATACTTCTGAGGCAGAAGAGAGTGAAGAGAATGACTTTGGTAGGGCTGCAGCACTTTCTGTTCCCCTAGCAGCCTTTCGATTCGTCACCAGACTTGCCTCAGGAATATTCTCAAGGGGCCAAAGAAACTTAGATCCTGATCACACGCAGTCAAAAGGAGAAAGTGAACATAGTGAGGAGTCTTGTTCTCAGAAATGTGTTGCCATTGATGGAGACAATTCAAGTAACAAGAATGAAAGAAATGCAGTAGTTGTTGCCCAAGAAGCATCTGAAATAGTAGAAGCATCTGAGACACAGCGTAGCTTGAGGAATGAAGATGCTCCCACGAGTTGCGACAATGATGCTTGTAGCTTCAAACACTTTGACATATCTAAAGATCCTTCAGACCATTATTTCATTGGTGCAAACGGACAGAGTAACAACCGAAAATGGTTTAAGAAGGTGCAACAAGATTGGAGCATACTGCAGAATAACCTTCCAGAGGAAATCTATGTACGAGTTTATGAAGATAGAATGGATCTTTTGAGAGCAGTTATTGTAGGGCCATATGGGACCCCTTACCAAGATGGGCTCTTTTTCTTTGATTTTCACCTTCCATCAGAGTACCCCGATGTTCCACCATCAGCATACTATCATTCTGGTGGTTGGCGTATTAACCCTAATTTGTATGAGGAAGGGAAGGTCTGCCTTAGCCTTCTAAATACATGGACAGGCAGAGGAAATGAAGTGTGGGATCCAAAATCTTCCAGCATCCTTCAAGTCCTAGTTTCACTGCAAGGTTTGGTGCTCAATGCTAAGCCTTACTTCAATGAAGCTGGGTATGATAAGCAGATTGGAACAGCAGAAGGAGAGAAGAATTCACTGTCATACAATGAGAATACATTTTTACTTAGCTGCAAGACTATGATGTATCTTGTGCGGAAACCCCCGAAGGACTTTGAAGTGCTCATCAAAGAACATTTTAGGAGGCGTGGTCATAACATCCTTAAGGCTTGTGATGCATATATGAAAGGTTACTTGATTGGCTCATTGACTAAAGATGCCTCTGTAAGTGACAAGAGCGATCAGAATTCAACTTCCGTGGGCTTCAAGTTGATGTTAGCCAAGATAGTGCCAAAGCTTTTCTCGTCCTTGAGTGAGGTTGGAGCTGATAGCCAGGAATTCAAGCATCTGAAAGAGTTGTAG 3399 0.4325 MGVQQREALPEDNETAGNACASGSSNQGDVVSVSAVRNPSVNAESSEVDGPGGISCKKNDAPHIYRQDVVKNITNGMIGIVTEVVGDSDSDSDSSITDDEDDSEDEGGDVEEGNGDDSNNASRNSDRNGTDRHCKTDALLPDQLRVLWMDESESTQNFSDIEVVDRGFLHGDFIASASDPTGQVGVVVDVNITVDLLAPDGSLIKEVSSKNLKRIRDFTVGDYVVLGPWLGRIDDVLDNVTVLFDDGSVCKVTKADPLNLKPVSKNILEDGHFPYYPGQRVRASSSSVFKNSRWLSGLWKANRLEGTVTKVTVGSVFVYWIASAGYGPYSSTAPAEEQSPRNLKLLSCFAHANWQLGDWCLLPSSALPSSISMEKGILKMERNDPINELDSNQTGSGCDSEEAAVEESNGSKNAMDLDPVDALDDGNVVSNPSHDSSSCGSSISVAKDPVHESWPLHRKKIRKVVIRKEKRARKKEEIFEKALLIANTKTQVDVAWQDGTIERGIHSTTLIPVDNPGDHEFVSEQYVIEKTSDDGEDTCEGRRVGVVRSVIAKERTACVRWLKPVERAEDPREFGKEEIVSVYELEGHPDYDYCYGDVVVRLSPVSVCPETDSVGESTEKSVQRNDECGSKMETKSRTGASKAENAAGGETCAEFSDLSWVGNITGLKNGDIEVTWADGMVSTVGPQAIYVVGRDDDDESIVAGSELSDAASWETVNDDEMEVLEDSKEDIERGNSSSDTSEAEESEENDFGRAAALSVPLAAFRFVTRLASGIFSRGQRNLDPDHTQSKGESEHSEESCSQKCVAIDGDNSSNKNERNAVVVAQEASEIVEASETQRSLRNEDAPTSCDNDACSFKHFDISKDPSDHYFIGANGQSNNRKWFKKVQQDWSILQNNLPEEIYVRVYEDRMDLLRAVIVGPYGTPYQDGLFFFDFHLPSEYPDVPPSAYYHSGGWRINPNLYEEGKVCLSLLNTWTGRGNEVWDPKSSSILQVLVSLQGLVLNAKPYFNEAGYDKQIGTAEGEKNSLSYNENTFLLSCKTMMYLVRKPPKDFEVLIKEHFRRRGHNILKACDAYMKGYLIGSLTKDASVSDKSDQNSTSVGFKLMLAKIVPKLFSSLSEVGADSQEFKHLKEL* 1133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0282 1132 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 881 1041 IPR000608 -
Dod06g0282 1132 MobiDBLite consensus disorder prediction 777 801 - -
Dod06g0282 1132 MobiDBLite consensus disorder prediction 783 801 - -
Dod06g0282 1132 MobiDBLite consensus disorder prediction 83 135 - -
Dod06g0282 1132 MobiDBLite consensus disorder prediction 92 113 - -
Dod06g0282 1132 MobiDBLite consensus disorder prediction 609 648 - -
Dod06g0282 1132 Gene3D Ubiquitin Conjugating Enzyme 849 1118 IPR016135 -
Dod06g0282 1132 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 59 1130 - -
Dod06g0282 1132 MobiDBLite consensus disorder prediction 617 633 - -
Dod06g0282 1132 MobiDBLite consensus disorder prediction 386 445 - -
Dod06g0282 1132 SMART ubc_7 884 1041 - -
Dod06g0282 1132 MobiDBLite consensus disorder prediction 725 751 - -
Dod06g0282 1132 MobiDBLite consensus disorder prediction 1 59 - -
Dod06g0282 1132 SUPERFAMILY UBC-like 863 1048 IPR016135 -
Dod06g0282 1132 MobiDBLite consensus disorder prediction 429 444 - -
Dod06g0282 1132 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 23-RELATED 59 1130 - -
Dod06g0282 1132 Pfam Ubiquitin-conjugating enzyme 886 1030 IPR000608 -
Dod06g0282 1132 MobiDBLite consensus disorder prediction 17 45 - -
Dod06g0282 1132 CDD UBCc 884 1034 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0282 Dod-Chr6 3799567 3806229 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0282 165 366 Miscellaneous Gene Families AT2G33770 41.379 8.18e-50 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0282 K10581 - gmx:100809513 1741.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0282 06 3799567 3806229 Dod06g0282 06 3799567 3806229 ECH