Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0078 ATGCCGTTTCCATCGTTGTCACTGGTTGCGTGGTGCGCCTTGTCCCTCGCAGTTTGTGCCTACCCGGCGGTCGGTGACGGCAACCTGGTACCTCCTCGGCGGGAAGTGTACGATGATGGCCGAATATTGGACATCAGTCACAGGTACCACCCTGACATGCCAGAGTGGAAGTCCAACCGTGGCATCGGCCACTTCCTGTGGCTCCAAAAGAGCATCAAGAACGGTTCCCGCTCCAACGCCTCCCAAATGAAGCTTCCTACTCACACCGGCACCCACGTTGACGCCCCCGGCCACTTCTTTGATCACTACTTCGATGCTTCATTCGATGTCGATTCACTCGACTTGCGCGTCCTCAATGGCCCTGGTCTGCTGATCGATGTTCCAAGAGATAAAAACATAACTGCTGAAGTTATGAAGTCATTAAATATTCCAAAGGGTGTCAATCGTGTGCTTTTCCGAACATCGAATACCGACAGGCGGCTTATGTTTCAGAAGGAATGTGACACAAGCTATGTTGGATTCACAACGGATGGAGCTAAATGGCTAGTGGAGAACACTGATATCAAACTTATAGGAATTGATTACTTATCTGTTGCTGCTTATGATCACTTGATGCCAGCTCACCTTGTTTTCTTGAAAGACAGGGAAATCATTCTTGTGGAAGCTCTGAAGCTTGATGATGTCCCAGGAGGAACATATTCAATTCGTTGCTTACCTCTTAGGATGATCTTTTATGTACAGAAAATTTTCTCATCTAAGGAATGTGTTGGCGACACTGGTATGCGTAGTTTGAAGTTTGAACAAAGTGAAAATAATGCGTTTGTGACTTGGATAAGCTCTGTGGCATCACTAATACGGTGCATTAATTCTCATCAGTCAAATGCTGATGCAGAAGGGTTAAACTGCTGCAGGAAACAGCGTAGTCCCGATTATGTAGCAGATGTTTGTGGACAGAGCCAGACATTAACGATGAAGACTCCGACAGCGTTGTCACTGTTTGTGTGGTGCGCCTTGTGCCTCGCAGTTTGTGTGGGCGGGGACGGCAAGCTCGTACCTCCACGGCGGGAAGTGTACGGCAATGGCCGAATATTTGACATCAGTCACAGGTACACCCCGGACATGCCAAGTTGGGATTCCAAACACGGCATCGGGCAGTTCCTGTGGCTCCAAAAGAGCATGAAGAACGGTTCCATCGCAAACTTCTCCTACTTCAAGCTCCCTACTCACACCGGCACTCACGTTGACGCCCCTGGCCACGTCTTTGATCGCTACTTCGATGCTGGCTTCGATGTCGACTCACTCGACTTAGACGTCCTCAATGGCCCTGCTCTGTTGGTCGATGTTCCAAGAGATAACAATATAACTGCTGAAGTTATGAAGTCGTTAAATATTCCAAGGGGTGTCAATCGAGTGCTCTTTCGAACACTGAATACCGACAGGCGACTTATGTTTCAGAAGGAATTTGACACAAGCTATGTAGGATTCACAGTGGATGGAGCTAAATGGCTAGTGGAGAACACTAATATCAAACTTATAGGAATTGACTACTTATCTGTTGCTGCTTATGAAAATCATTTGATTCCAGTTCACCTTGTTTTCCTAAAAGACAGGTTGACAATGGCTAGTTTGGTTCTTAATTCTGCTATTAGTGGCAGCAAAGGCTTCAGAACATATACATCGACCATGGATGCACGTGTATCCGATGGCAGTGGGGGGTGCCAGATGATTGATTGA 1734 0.4729 MPFPSLSLVAWCALSLAVCAYPAVGDGNLVPPRREVYDDGRILDISHRYHPDMPEWKSNRGIGHFLWLQKSIKNGSRSNASQMKLPTHTGTHVDAPGHFFDHYFDASFDVDSLDLRVLNGPGLLIDVPRDKNITAEVMKSLNIPKGVNRVLFRTSNTDRRLMFQKECDTSYVGFTTDGAKWLVENTDIKLIGIDYLSVAAYDHLMPAHLVFLKDREIILVEALKLDDVPGGTYSIRCLPLRMIFYVQKIFSSKECVGDTGMRSLKFEQSENNAFVTWISSVASLIRCINSHQSNADAEGLNCCRKQRSPDYVADVCGQSQTLTMKTPTALSLFVWCALCLAVCVGGDGKLVPPRREVYGNGRIFDISHRYTPDMPSWDSKHGIGQFLWLQKSMKNGSIANFSYFKLPTHTGTHVDAPGHVFDRYFDAGFDVDSLDLDVLNGPALLVDVPRDNNITAEVMKSLNIPRGVNRVLFRTLNTDRRLMFQKEFDTSYVGFTVDGAKWLVENTNIKLIGIDYLSVAAYENHLIPVHLVFLKDRLTMASLVLNSAISGSKGFRTYTSTMDARVSDGSGGCQMID* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0078 577 Gene3D Putative cyclase 358 572 IPR037175 GO:0004061|GO:0019441
Dod06g0078 577 Gene3D Putative cyclase 37 243 IPR037175 GO:0004061|GO:0019441
Dod06g0078 577 PANTHER KYNURENINE FORMAMIDASE-LIKE ISOFORM X1 24 243 - -
Dod06g0078 577 PANTHER KYNURENINE FORMAMIDASE-LIKE ISOFORM X1 344 538 - -
Dod06g0078 577 SUPERFAMILY Putative cyclase 361 540 IPR037175 GO:0004061|GO:0019441
Dod06g0078 577 PANTHER CYCLASE-LIKE PROTEIN 2 24 243 IPR007325 GO:0004061|GO:0019441
Dod06g0078 577 PANTHER CYCLASE-LIKE PROTEIN 2 344 538 IPR007325 GO:0004061|GO:0019441
Dod06g0078 577 SUPERFAMILY Putative cyclase 40 242 IPR037175 GO:0004061|GO:0019441
Dod06g0078 577 Pfam Putative cyclase 364 519 IPR007325 GO:0004061|GO:0019441
Dod06g0078 577 Pfam Putative cyclase 44 198 IPR007325 GO:0004061|GO:0019441
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0078 Dod-Chr6 1035663 1044799 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0078 - - gmx:100782032 380.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0078 06 1035663 1044799 Dod06g0078 06 1035663 1044799 ECH