Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0076 ATGCAAAACCTCCTCTGTCTTTGCCTAACCATTATTTTCATATCTCTGCCGCACACAAACACTTTCCATGTGCAAGCTCTTACTTCAGCCTCAGACATTGCAGCACTCAAAGCGTTCAAGGCCTCAATCAAACCCTCCTCAATCACACCCTGGTCATGCCTAGGATCATGGAACTTCACCACTGACCCATGCTCAACTCCACGCCGCACCTACTTCACGTGCGGGATCACCTGCACCCCTGACTCCAAACGGATCAACCAAATCACCCTCGACCCCGCAGGGTACACAGGAACACTCACCCCACTCATCTCTCAACTCACAAGCCTCATCACCCTCGACCTCTCCGACAACTCCTTCTACGGCCCAATCCCCTCTTCACTCTCTTCCCTCTCCAACCTCCAAACCTTAGCCCTCCGATCCAATTCCTTCACAGGCTCAATCCCTCCCTCCATAACCACCCTCAAATCCCTCCAATCCCTCGACCTTTCACACAATTCCCTATCTGGGTCCCTCCCAAACTCCATGAATTCACTCACCAGCATCCGCAGGATCGACCTCAGCTTCAACAAGCTCACAGGTTCAATCCCGAAGTTACCACCCAACTTGCTAGACCTTGCGATCAAGGCGAATTCTCTATCTGGGGTTCTCCAAAAAATGACCTTTGAAGGGTTGAACCAATTGGAAGTGGTGGAACTCAGCGACAACGCACTTGTGGGGAAGATTGAAGCGTGGTTTTTTCTTTTGCCTTCGTTGCAGCAAGTGGATTTGGCAAATAACAGCTTCACGGGGGTTGAGATCTCGAGGCCAGTTGGCGGTGGCGGAAGCAACCTCGTGGCGGTGAACCTCGGATTTAACAGAATCCAAGGGAACGCGCCCGCGGATCTCGGCGCGTATCCGATGCTGTCGTTTTTGTCGATTCGTCACAACGCGCTACGTGGCGCGATTCCGTTGGAGTACGGTAAAAGTAGGTCCATGAGAAGGTTGTTCCTGGACGGGAACTACCTGGTGGGGAAGCCGCCGCCGGGGCTGGTGGCGGCGCGGACGGCGGTTTCCGGCAGCTTGGGGGACAACTGCCTGGAAGGGTGTCTAGTTTCGTCGCAGCTGTGCACGCCCGCACAGAAACCCAGCTCTGTTTGCAAGCAAGCCTACCGTGGAAGACCAACGAGATAG 1170 0.541 MQNLLCLCLTIIFISLPHTNTFHVQALTSASDIAALKAFKASIKPSSITPWSCLGSWNFTTDPCSTPRRTYFTCGITCTPDSKRINQITLDPAGYTGTLTPLISQLTSLITLDLSDNSFYGPIPSSLSSLSNLQTLALRSNSFTGSIPPSITTLKSLQSLDLSHNSLSGSLPNSMNSLTSIRRIDLSFNKLTGSIPKLPPNLLDLAIKANSLSGVLQKMTFEGLNQLEVVELSDNALVGKIEAWFFLLPSLQQVDLANNSFTGVEISRPVGGGGSNLVAVNLGFNRIQGNAPADLGAYPMLSFLSIRHNALRGAIPLEYGKSRSMRRLFLDGNYLVGKPPPGLVAARTAVSGSLGDNCLEGCLVSSQLCTPAQKPSSVCKQAYRGRPTR* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0076 389 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 11 387 - -
Dod06g0076 389 Pfam Leucine rich repeat 131 191 IPR001611 GO:0005515
Dod06g0076 389 Pfam Leucine rich repeat 200 260 IPR001611 GO:0005515
Dod06g0076 389 Pfam Leucine rich repeat N-terminal domain 30 65 IPR013210 -
Dod06g0076 389 SMART LRR_typ_2 106 130 IPR003591 -
Dod06g0076 389 SMART LRR_typ_2 154 177 IPR003591 -
Dod06g0076 389 SMART LRR_typ_2 178 205 IPR003591 -
Dod06g0076 389 SMART LRR_typ_2 248 269 IPR003591 -
Dod06g0076 389 SUPERFAMILY L domain-like 73 340 - -
Dod06g0076 389 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 11 387 - -
Dod06g0076 389 Gene3D Ribonuclease Inhibitor 200 371 IPR032675 -
Dod06g0076 389 PRINTS Leucine-rich repeat signature 157 170 - -
Dod06g0076 389 PRINTS Leucine-rich repeat signature 178 191 - -
Dod06g0076 389 ProSiteProfiles Leucine-rich repeat profile. 156 178 IPR001611 GO:0005515
Dod06g0076 389 Pfam Leucine Rich Repeat 108 130 IPR001611 GO:0005515
Dod06g0076 389 Gene3D Ribonuclease Inhibitor 29 199 IPR032675 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0076 35 383 Receptor kinase-like Gene Family AT3G05360 32.172 5.31e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0076 - - gmx:100801713 605.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0076 06 1018050 1019995 Dod06g0076 06 1018050 1019995 ECH