Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0054 ATGGCGAGGAGGTTTCTGGCCGCGGCGGCAGCCGCTGCGATAACTGTCTCCATACTGTTGGGAGACACCGCCTATTGCTTCGACGGCGGCGGCGGCCAACCCGAACAACAACCCACTTTGTGCGACGAGCTTATTCTCCCCGCCGGTTACCCCTGTTCTGAATATATGATTCAAACGAAGGATGGTTTCTTGTTAGGTCTTCAACGTGTCTCTTCTTCTTCTTCTCTTCGTTTCGGGCATGAAGGAGAGCGAGGCCCTCCTGTTCTGCTTCTGCATGGCCTATTCATGGCAGGTGATGCATGGTTTCTAAATACTCCAGAACAATCATTGGGCTTCATCCTTGCGGATCATGGTTTTGATGTTTGGGTAGGAAATGTGCGTGGAACACGATGGAGCCATGGCCATATATCTTATTCAAAGAAGAAGAAGCGTTTTTGGGATTGGAGTTGGCAGGAATTAGCTCTGTATGATATGGCAGAAATGATCAATTACATTAATTCGGTAACAAACTCAAGGCTATTTATAGTTGGGCACTCACAGGGAACAATTATGTCTTTTGCTGCCTTCACTCAACCAGATATAGTAGAAAAAGTTGAGGCTGCAGCTCTTCTTTCTCCAATATCCTATTTGGATCATGTCAGTGCACCCCTTGTGCTTAGAATGGTTAACATGCGCCTTGATCAGATGATTCTTTCCATGGGCATTCATCAACTGAACTTCAAAAGTGAATGGGGAGCAAGTCTCTTGGTTTCGCTTTGTGATACCCGTCTAAGTTGCAGTGACATGCTTTCATCCATAACAGGGAAGAATTGTTGCCTCAATGAGTCACGGGTGGCCTATTATCTTGAACAAGAACCTCACCCGTCATCCTCCAAAAACTTGAATCACCTTTTCCAGATGATCCGCAAAGGTACTTTCTCAAAGTATGATTATGGAACGCTAAAAAATATGAGAGTGTATGGCAAATCCAAACCACCAAAGTTCGATCTTGGCCACATTCCCAAATCACTACCTCTGTGGATGGCTTATGGTGGAAATGATGCTTTAGCAGATATAAATGATTTCCAGCACACTCTCAAGGAATTGTCATCCACGCCTGAGCTGGTATATCTTGAAAACTATGGTCATGTTGACTTCATTTTAAGCTTGCGAGCAAAACAAGATCTTTATGACCCTATGATTAATTTTTTCAAGTCATCGGGTAAATATAGTAGTATTTAA 1221 0.439 MARRFLAAAAAAAITVSILLGDTAYCFDGGGGQPEQQPTLCDELILPAGYPCSEYMIQTKDGFLLGLQRVSSSSSLRFGHEGERGPPVLLLHGLFMAGDAWFLNTPEQSLGFILADHGFDVWVGNVRGTRWSHGHISYSKKKKRFWDWSWQELALYDMAEMINYINSVTNSRLFIVGHSQGTIMSFAAFTQPDIVEKVEAAALLSPISYLDHVSAPLVLRMVNMRLDQMILSMGIHQLNFKSEWGASLLVSLCDTRLSCSDMLSSITGKNCCLNESRVAYYLEQEPHPSSSKNLNHLFQMIRKGTFSKYDYGTLKNMRVYGKSKPPKFDLGHIPKSLPLWMAYGGNDALADINDFQHTLKELSSTPELVYLENYGHVDFILSLRAKQDLYDPMINFFKSSGKYSSI* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0054 406 Pfam Partial alpha/beta-hydrolase lipase region 43 105 IPR006693 GO:0006629
Dod06g0054 406 SUPERFAMILY alpha/beta-Hydrolases 42 398 IPR029058 -
Dod06g0054 406 PIRSF Steryl_ester_lip 5 402 IPR025483 GO:0016788
Dod06g0054 406 Gene3D alpha/beta hydrolase 32 399 IPR029058 -
Dod06g0054 406 PANTHER LYSOSOMAL ACID LIPASE-RELATED 34 400 - -
Dod06g0054 406 PANTHER TRIACYLGLYCEROL LIPASE 1 34 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0054 Dod-Chr6 778813 785099 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0054 39 405 Acyl Lipid Metabolism Gene Families AT2G15230 64.305 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0054 K01052 - gmx:100803830 699.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0054 06 778813 785099 Dod06g0054 06 778813 785099 ECH