Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2669 ATGCTTGCGGAGGAGAAGCCTCAAAAGACATACCCAACAATAGCCGAGGTGTCGGAGGAACTAAAGAGAATGACGGACATAGGGTTCCCAATAGCAGCCATGAGCCTTGTGGGATACCTCAAAAACATGACCTTAGTTGTGTGCATGGGAAGGTTGGGGAGCCTCGAGTTAGCCGGTGGTGCTTTGGCCATAGGCTTCACCAACATAACCGGTTACTCTGTCCTCTCAGGTCTAGCCATGGGCATGGAACCCCTCTGCAGCCAGGCCTTTGGTTCTAGAAACTTCTACTTAGTCTCTCTCACTCTACAAAGGACAATTCTCATGCTACTTCTACTTTCCCTACCCATTTGTCTCCTTTGGCTCAACCTCGAACCCGTCATGCTTTTGCTTCACCAAAACCCGGACATAACCCGAGTTGCAAGCCTCTATTGCCTCTTCTCCATCCCGGACCTCGTAGCCAATAGCTTCCTTCACCCTCTTCGCATCTACTTGCGTAGCAAAGGCACAACTTGGCCACTAATGTGGTGCACTTTGCTAGCCATTGTCCTACACATCCCCATCATCTACCTTTTGACCTTCAAACTTCAGCTAGGTGTACCCGGAATCGCTATCTCAGCCTTTGTTGCCAATTTCAACACCCTTTTCTTCCTCCTCTTATACATGTTCTACACACGTGTGATCCCCAAGGAGTCCCTATCCATGCCATTAATAATACCCCGTCCCTTGTCATCACATAACATAATAATAACTAGTACTGCTATTGCCACACTAGGCAAAGAATGGGGCATGCTAATGAAGTTTGCAATACAAAGTTGTTTAGCCGTTTGCTTGGAATGGTGGTGGTATGAATTGATGACAATCTTAGCCGGTTACCTTTACAACCCTCGTGTGGCTCTAGCCACTGCCGGAATAGTGATACAAACAACCTCTCTTATGTACAATTTGCCCACAGCACTCAGTGCATCGGTGTCCACAAGAGTTGGCAACGAACTCGGGGCGGGTCAACCCGAAAGGGCAAGCTTGTCAACGGTGGTGGCCATAGGATTAGCACTTGCAAGCTCAATTTTGGGGTTGTTGTGGACCACAATTGGGAGAGAAAGATGGAGTAGGGTGTTCACAAGTGATAGTGAAGTTTTGCAGTTGACCATGGTTGTGTTGCCTATAATTGGAGTGTGTGAACTAGCAAACTGTCCTCAAACAACAAGCTGTGGAATACTTAGAGGGAGTGCTAGGCCTGGTGTTGGAGCAGCCATAAACTTTTGCTCGTTTTACTTGGTGGGAGCACCGGTGGCCATAGTTTTGGCCTTCGTTTGGGAGCTTGGGATGGTTGGTCTGTGTTATGGGCTGCTTGCAGCGCAAGTCGCGTGTGTGGTCTCCATTCTTGTTGTGGTGTACAAGACCGATTGGGAAAGGGAGTCATTGAAGGCCAAAAGCTTGGTCGGAAAGGGTGGTTCATGCGACACATTCGCACATGCAGACCAAACAGTCAAACGTGAAGAAGGTGTTGCCTTTCTCAAAGAGAACAACAGTACCGAAATGAGATGA 1545 0.4822 MLAEEKPQKTYPTIAEVSEELKRMTDIGFPIAAMSLVGYLKNMTLVVCMGRLGSLELAGGALAIGFTNITGYSVLSGLAMGMEPLCSQAFGSRNFYLVSLTLQRTILMLLLLSLPICLLWLNLEPVMLLLHQNPDITRVASLYCLFSIPDLVANSFLHPLRIYLRSKGTTWPLMWCTLLAIVLHIPIIYLLTFKLQLGVPGIAISAFVANFNTLFFLLLYMFYTRVIPKESLSMPLIIPRPLSSHNIIITSTAIATLGKEWGMLMKFAIQSCLAVCLEWWWYELMTILAGYLYNPRVALATAGIVIQTTSLMYNLPTALSASVSTRVGNELGAGQPERASLSTVVAIGLALASSILGLLWTTIGRERWSRVFTSDSEVLQLTMVVLPIIGVCELANCPQTTSCGILRGSARPGVGAAINFCSFYLVGAPVAIVLAFVWELGMVGLCYGLLAAQVACVVSILVVVYKTDWERESLKAKSLVGKGGSCDTFAHADQTVKREEGVAFLKENNSTEMR* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2669 514 Pfam MatE 271 432 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod05g2669 514 Pfam MatE 30 190 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod05g2669 514 CDD MATE_eukaryotic 20 475 IPR045069 GO:0042910|GO:1990961
Dod05g2669 514 TIGRFAM matE: MATE efflux family protein 30 445 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod05g2669 514 PANTHER PROTEIN DETOXIFICATION 55 12 485 - -
Dod05g2669 514 Coils Coil 502 514 - -
Dod05g2669 514 PANTHER MULTIDRUG RESISTANCE PROTEIN 12 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2669 Dod-Chr5 52860966 52863115 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2669 K03327 - gmx:100801932 768.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2669 05 52860966 52863115 Dod05g2669 05 52860966 52863115 ECH
Dod05g2669 05 52860966 52863115 Dod03g1308 03 16662844 16665568 PCT