Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2617 ATGGTGGGGCGCGACATAGACGAATTGCCAAAGAACGCAGCCAACTACACGGCCTTGACGCCCTTGTGGTTCCTAGAGAGAGCAGCTCAGGTGCACCCCACCAGAAAATCCGTGATCCACGGATCCCGTCACTACACGTGGCAACAGACATACCAGCGTTGCCGTCGATTGGCCTCCGCTCTTTCCAACCGTTCCATCGGTCTTGGCAACACCGTAGCTGTAATCGCACCCAACATTCCAGCTCTTTATGAAGCTCATTTTGGAATTCCAATGGCAGGAGCAGTATTAAACCCTGTTAATATTAGGCTGAATGCATCCACAATAGGTTTCCTTCTTGGCCATTCCTCTGCTGCAGCTGTAATTGTGGATCAAGAGTTCTTTACATTGGCAGAGGAGGCTTTGAAAATCTGTTCTGAGAAAAACAAAAACTTCAGGCCTCCACTTCTGATTGTGATCGGTGACGAGAACTGCGATCCTAAGGCATTAAGATATGCTCTGGGCAAAGGAGCCATTGAATATGAGAATTTTCTCGAGAGTGGTGACCCTAAATATGCATGGAAACCCCCAGAGGATGAGTGGCAGAGCATTGCCTTGGGTTACACTTCTGGTACCACTGCTAGCCCTAAAGGTGTGGTGTTACACCACCGAGGAGCTTATCTCATGTCTCTGAGTGGAGCTCTTATTTGGGGAATGAATGAAGGAGCTGTATACCTGTGGACACTTCCCATGTTTCATTGCAATGGTTGGTGCTACACTTGGTCACTTGCAGCTCTTTGTGGTACAAACATATGTCTTCGTCAGGTAACCGCTAGGGCAGTGTACGAAGCCATTGCCAAGTACAAAGTGACTCATTTTTGTGCAGCACCGGTGGTTCTTAATACAATAGTTAATGCCCCACCCGAGGAAACAATCCTTCCTCTGCCCCGTGTTGTACATGTGAACACAGCTGGGGCTGCTCCTCCTCCTTCTGTTCTTGCCGCCATGTCTCAAAGAGGATTTCGCGTCACGCACACTTATGGTCTCTCAGAAACCTATGGTCCCTCCACAGTCTGTGCCTGGAAACCAGAATGGGAATCACTTCCCCCTGAAACACAAGCCCGGCTCAACGCAAGGCAAGGGGTTCGGTACATTGGCTTGGAAGGCCTCGATGTTGTGAACACAAAAACCATGCAACCTGTTCCTGCTGATGGTAAAACCATTGGTGAGATTGTGATGCGGGGGAATCTTGTGATGAAAGGCTACTTAAAGAATCCTAAAGCTAATGAAGAGACTTTTGCAAATGGATGGTTTCATTCTGGTGATCTAGCTGTTAAGCATCCTGATGGATACATAGAAATCAAAGACCGATCAAAGGACATCATCATATCTGGTGCTGAAAACATCAGCAGTGTAGAGATAGAGAATATTCTGTATTCACATCCTGCAATACTGGAGGCATCAGTGGTAGCAAGGCCAGATGAGAAATGGGGAGAGTCTCCCTGTGCTTTTGTGACATTGAAGCAAGGAGTGGATACTAGTAATGAGCAGCGCCTTATTGAGGATATAATAAAGTTCTGCAGGGCCAAGATGCCTGCTTATTGGGTCCCAAAATCAGTGATCTTTGGACCTTTACCAAAGACAGCTACAGGCAAGATACAGAAGCATTTGCTGAGGGCCAAGGCAAAAGAGATGGGGCCTGTCAAGATCAGCAAGTTGTAA 1698 0.4747 MVGRDIDELPKNAANYTALTPLWFLERAAQVHPTRKSVIHGSRHYTWQQTYQRCRRLASALSNRSIGLGNTVAVIAPNIPALYEAHFGIPMAGAVLNPVNIRLNASTIGFLLGHSSAAAVIVDQEFFTLAEEALKICSEKNKNFRPPLLIVIGDENCDPKALRYALGKGAIEYENFLESGDPKYAWKPPEDEWQSIALGYTSGTTASPKGVVLHHRGAYLMSLSGALIWGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTNICLRQVTARAVYEAIAKYKVTHFCAAPVVLNTIVNAPPEETILPLPRVVHVNTAGAAPPPSVLAAMSQRGFRVTHTYGLSETYGPSTVCAWKPEWESLPPETQARLNARQGVRYIGLEGLDVVNTKTMQPVPADGKTIGEIVMRGNLVMKGYLKNPKANEETFANGWFHSGDLAVKHPDGYIEIKDRSKDIIISGAENISSVEIENILYSHPAILEASVVARPDEKWGESPCAFVTLKQGVDTSNEQRLIEDIIKFCRAKMPAYWVPKSVIFGPLPKTATGKIQKHLLRAKAKEMGPVKISKL* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2617 565 CDD ttLC_FACS_AEE21_like 16 552 - -
Dod05g2617 565 Pfam AMP-binding enzyme 25 456 IPR000873 -
Dod05g2617 565 PANTHER ACYL-ACTIVATING ENZYME 3 565 - -
Dod05g2617 565 SUPERFAMILY Acetyl-CoA synthetase-like 13 556 - -
Dod05g2617 565 Gene3D - 4 451 IPR042099 -
Dod05g2617 565 Pfam AMP-binding enzyme C-terminal domain 465 544 IPR025110 -
Dod05g2617 565 Gene3D - 452 560 IPR045851 -
Dod05g2617 565 PANTHER DEPENDENT LIGASE, PUTATIVE-RELATED 3 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2617 Dod-Chr5 52423399 52426586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2617 4 565 Miscellaneous Gene Families AT3G16910 77.265 0.0 936
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2617 K01913 - gmx:100808187 1058.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2617 05 52423399 52426586 Dod05g2617 05 52423399 52426586 ECH