Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2592 ATGAACGCCATTCCTTCTCCACCTTCTTCCTCTCCAAACTTCAGTCTCTTCACTACTCAGTCCAAGCACCAAAACTACCTCTTCAAGTTCAACCTCAAAATACCCATTTTGCCCTCTGCACCATGTTGCGTCAGGGACTCCTCCTCCTCATCGACCACCGTGTTGGACCAAAATGCCCTTCCCTCCCAACAGAGTCCCGGCGGCAATGCCGTTTCGCCTAGAGACTTGAGCTTTGAGGGAGGGCTCGTGGTTCGCCGGCCGGTGATGGAGTTTTCCGGTGATGGTTCCGATGATGAGGAAGAAGGGAAGGAAGCGCCAGAGGGGGATGATGACGATGCACGGAACGGTGCTTCTGCGGTCGACGCGAGGCTGACGAAGTTCGCGAAGAAGATGCCAATGTTTGAGCCCGAAAGGGTGGAATTGGATTCCAAAGAGAAGCCGCTAACTGTGAACTTGGACTTGGCATTGTACAGGGCAAAGGTTCTGGCTAGAAAGTTTCAGTATGGAGAAGCAGAGGAAATACTTCAGAAGTGTATATGCAATTGGCCGGAAGATGGTCGACCTTATGTGGCACTTGGGAAAATTTTGAGCAAACAATCTAAGACAAGTCAAGCCAGAGAAGTATACGAGAAGGGTTGCCAGGCTACTCAGGGTGAAAATGCTTATATTTGGCAGTGCTGGGCTGTTCTTGAAAAGAAAATGGGAAATTTCAGGAGAGCAAGAGACTTATTTGATGCTGCGACGGTTGCTGATAAGAGGCATGTTGCTGCTTGGCATGGATGGGCAGTTCTAGAGTTAAAGCAGGGAAATATAAAGAAGGCAAGGAGTTTGCTTGTAAAAGGTCTTAAATATTGTGGACAGAATGAGTACATTTACCAGACACTGGCATTGCTTGAAGTTAGAGCAAATAGGTATCAGCAGGCTCGATATTTGTTCAATCAGGCCACTAAGTGTAATCCTAACAGCTGTGCTAGTTGGCTTGCTTGGGCACAAATGGAGGTCGAACAGGAAAACTACCGTGCTGCTAGGCAATTGTTTGAGAAAGCAGTACAGGCAAGTCCCAAAAATAGGTTTTCTTGGCATGTATGGGGCATCTTTGAAGCTAACATGGGCAACATTGACAAGGGAAGAAAACTTCTAAAGATAGGCCATGCTCTAAATCCGAGGGATGCTGTTCTGCTTCAGTCTCTTGCTTTGTTAGAATACAAGCACTCAACTGCAAATCTTGCTCGGGTCTTGTTCAGGAGGGCAGCTGAATTGGATCCAAGGCATCAACCTGTTTGGTTTGCTTGGGGTTGGATGGAATGGAAGGAAGGGAACTTGAATACAGCTAGAGAATTATACCAAAAGGCCTTATCAATTGATTCAAACAGTGAGAGTGCTGCAAGGTGTCTTCAGGCTTGGGGTGTTCTGGAGCAGAGGGTTGGTAATCTTTCAGCTGCCCGCAGATTATTTAGATCCTCATTGAACATAAATTCTCAGAGTTATGTGACATGGATGACCTGGGCATCATTGGAGGAAGATCAAGGAAATTCTGCGCGTGCTGAAGAGATTCGTAACCTCTACTTCCAGCAGCGCACGGAAGTTGTGGATGATGCTTCATGGGTTATGGGATTCTTAGATATCATAGACCCAGCCGTTGACCGTTTGAAGAGACTCCTCAAGCTGGACCAGAATTCTTACAACATGCCGCAGGATTCTTTGAGAAGTATTGCCGGAGCAAATAAAAACAAGGTTGATTTAGACAGCTCAACTTCAACTGGCAATGATGGTGAAGATGATGAAAGTCATTTCGATTTGGATGCTTTCATTATGGAAAGGCTGTCCTTAGATACGTCCAAATTGGAAGTTCAGCTGGAATCACCTGGAAGTTCTTATGGGAAGACAAGTAGGTCTCCAAGGAGGATTTGGAGGTCAAACAATAGAATCGCCAAAGTGTAA 1941 0.4621 MNAIPSPPSSSPNFSLFTTQSKHQNYLFKFNLKIPILPSAPCCVRDSSSSSTTVLDQNALPSQQSPGGNAVSPRDLSFEGGLVVRRPVMEFSGDGSDDEEEGKEAPEGDDDDARNGASAVDARLTKFAKKMPMFEPERVELDSKEKPLTVNLDLALYRAKVLARKFQYGEAEEILQKCICNWPEDGRPYVALGKILSKQSKTSQAREVYEKGCQATQGENAYIWQCWAVLEKKMGNFRRARDLFDAATVADKRHVAAWHGWAVLELKQGNIKKARSLLVKGLKYCGQNEYIYQTLALLEVRANRYQQARYLFNQATKCNPNSCASWLAWAQMEVEQENYRAARQLFEKAVQASPKNRFSWHVWGIFEANMGNIDKGRKLLKIGHALNPRDAVLLQSLALLEYKHSTANLARVLFRRAAELDPRHQPVWFAWGWMEWKEGNLNTARELYQKALSIDSNSESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYVTWMTWASLEEDQGNSARAEEIRNLYFQQRTEVVDDASWVMGFLDIIDPAVDRLKRLLKLDQNSYNMPQDSLRSIAGANKNKVDLDSSTSTGNDGEDDESHFDLDAFIMERLSLDTSKLEVQLESPGSSYGKTSRSPRRIWRSNNRIAKV* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2592 646 ProSiteProfiles TPR repeat profile. 425 458 IPR019734 GO:0005515
Dod05g2592 646 ProSiteProfiles TPR repeat profile. 323 356 IPR019734 GO:0005515
Dod05g2592 646 SMART tpr_5 425 458 IPR019734 GO:0005515
Dod05g2592 646 SMART tpr_5 221 254 IPR019734 GO:0005515
Dod05g2592 646 SMART tpr_5 255 288 IPR019734 GO:0005515
Dod05g2592 646 SMART tpr_5 323 356 IPR019734 GO:0005515
Dod05g2592 646 SMART tpr_5 391 424 IPR019734 GO:0005515
Dod05g2592 646 SMART tpr_5 462 495 IPR019734 GO:0005515
Dod05g2592 646 SMART tpr_5 289 322 IPR019734 GO:0005515
Dod05g2592 646 SMART tpr_5 186 219 IPR019734 GO:0005515
Dod05g2592 646 MobiDBLite consensus disorder prediction 619 637 - -
Dod05g2592 646 Gene3D Tetratricopeptide repeat domain 150 390 IPR011990 GO:0005515
Dod05g2592 646 Gene3D Tetratricopeptide repeat domain 403 542 IPR011990 GO:0005515
Dod05g2592 646 SUPERFAMILY TPR-like 166 401 IPR011990 GO:0005515
Dod05g2592 646 PANTHER PROTEIN HIGH CHLOROPHYLL FLUORESCENT 107 26 641 IPR044624 GO:0003729|GO:0006397
Dod05g2592 646 ProSiteProfiles TPR repeat profile. 289 322 IPR019734 GO:0005515
Dod05g2592 646 Pfam Tetratricopeptide repeat 427 457 IPR019734 GO:0005515
Dod05g2592 646 MobiDBLite consensus disorder prediction 565 586 - -
Dod05g2592 646 SMART hat_new_1 476 508 IPR003107 GO:0006396
Dod05g2592 646 SMART hat_new_1 405 437 IPR003107 GO:0006396
Dod05g2592 646 SMART hat_new_1 269 301 IPR003107 GO:0006396
Dod05g2592 646 SMART hat_new_1 303 335 IPR003107 GO:0006396
Dod05g2592 646 SMART hat_new_1 200 233 IPR003107 GO:0006396
Dod05g2592 646 SMART hat_new_1 337 369 IPR003107 GO:0006396
Dod05g2592 646 SMART hat_new_1 439 474 IPR003107 GO:0006396
Dod05g2592 646 SMART hat_new_1 371 403 IPR003107 GO:0006396
Dod05g2592 646 SMART hat_new_1 235 267 IPR003107 GO:0006396
Dod05g2592 646 MobiDBLite consensus disorder prediction 90 116 - -
Dod05g2592 646 MobiDBLite consensus disorder prediction 45 75 - -
Dod05g2592 646 MobiDBLite consensus disorder prediction 619 646 - -
Dod05g2592 646 Pfam Tetratricopeptide repeat 233 280 - -
Dod05g2592 646 Pfam Tetratricopeptide repeat 295 356 - -
Dod05g2592 646 MobiDBLite consensus disorder prediction 45 71 - -
Dod05g2592 646 MobiDBLite consensus disorder prediction 565 595 - -
Dod05g2592 646 SUPERFAMILY TPR-like 360 510 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2592 - - gmx:100819232 956.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2592 05 52189588 52193715 Dod05g2592 05 52189588 52193715 ECH