Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2535 ATGAAACGGTCATATTTAGTTCAAGGTTTGCCGAAAATGAAAAAATGGTATGGAGGCTTGTTGATCATGGTTCTGGTTATGATGTTGGTTCTCTTGTACAGCCTTAAAGGAATTCAACCTCAGAAACAGTCAGCAAAACAGTGGGCATACAATTTCTTCAATAACCATCAAGTAAACGATTCTATTACAGACAGAAAACTCACTGTTTACTCATCTGAGTTGGTAGAGAAACGAGTGCCAACACCTTGGAAAAGGCCACCTTCGGTACATGTTGAAGGGCTTGATGATCTGTATGACATGAAAAATGTATCTGAAGGAGAGATGAATGCTGTCCTTGTATGGTCTTCCTTGCATTCCTTGCTGTCGAGGTCAGATGCCTTGCCTGAAACAGCTCAAGGAGTTAGAGAGGCTTCTGTAGCATGGAAAAAGTTGCTGTCCACATTCGAAGAAGACAAAGCCACTAGGACTAGTAAGGTAGATAGCCCAGAAAATCAAAACTGCCCATTCTCTGTGACCACACTTGGTAAGACAGTTCCAGAAAGTGGAATCGCTCTCGAGCTCCCTTGTGGTCTGGTTATAGATTCTTCTATTACACTGATTGGCATCCCTATTGGGCAAAACAGTAGCTTTCAGATTGACCTTACTGGCCAAGAGCTAGAAGAGAAGCCAAATCCTCCTGTCGTCCTACATTACAATGTAAGTTTTCCTGGAGACAACATGACAGAGGAACCATATATAGTTCAAAACACATGGACTAGTGATTTTGGGTGGGGAAAAGAGGAAAGGTGTCCTGCTCATGGTTCTGCTAACATCCAAAAAGTTGATGGACTTGTTCTCTGCAATGTACAAGTTGTTGGAAGTAGCAACGAAGAGAATGTAACTGTGGGTCAACCTACTAGTGATATAACATCTAATATTTCCTCAGAAAGTGCACATAGAACTGCTAATTTCCCCTTTGCTGAGGGGAATCCTTTCACTGCCACATTGTGGGTTGGTTCAGAGGGATTTCATATGACTGTTAATGGAAGGCATGAAACATCATTTGCATATAGGGAGAAGCTTGAACCATGGTTAGTCAGCAACATTAAAGTAGCAGGCAATTTAAATATTTTATCAATCCTGGCTAAAGGCTTACCAGTTACTGAAGATAATGATATAATTGTTGATGTTGACAAACTGGAGGCTCCTCCTATCCCCAAAAAAAGGCTTGTTTTGTTGATTGGAGTGTTCTCTACTGGAAATAACTTTGAGCGTCGAATGGCACTAAGGAGGTCTTGGATGCAATACGAGGCTGTACGTTCCGGAGAAGTTGCAGTCCGGTTTTTCATTGGGCTTCACAAGAACAACAGAGTTAATTTTGAGTTGTGGAGAGAAGCTCAAGCATATGGAGATATTCAGTTAATGCCTTTTGTTGACTATTATAGTTTGATCACTTTGAAGACAATTGCAATCTGCATTATGGGGACGAAAATCATCCCTTCTAAATACATAATGAAAACAGATGATGATGCTTTTGTTAGGATTGATGAAGTGCTTTCTAGCCTCAAAGGAAAGCCATCTGAGGGTCTTTTGTTCGGTCTTATATCTTCTCAATCAACTCCTCAGAGGGACAAAAACAGCAAATGGTACATCAGTGAGAAGGAATGGCCACATGATACATACCCACCATGGGCACATGGTCCTGGCTATGTCCTCTCCCGAGACATAGCAAAATTCATTGTCCATGGTCACCAGGAAAGAAAACTCAAGCTCTTTAAATTGGAAGATGTTGCCGTGGGCATATGGATTGAACAGTTCAAGAAAGGTGGTAAAGAAGTGCATTATGCAAATGATGAGAGGTTTTACAATGTTGGATGTGAATCAAATTATGTGCTTGCCCATTATCAAAGCCCACGGATGGTGCTATGCCTTTGGGAGAAACTGCAGAAGGAACATAAGCCAGAATGCTGTGAGTAG 1956 0.4141 MKRSYLVQGLPKMKKWYGGLLIMVLVMMLVLLYSLKGIQPQKQSAKQWAYNFFNNHQVNDSITDRKLTVYSSELVEKRVPTPWKRPPSVHVEGLDDLYDMKNVSEGEMNAVLVWSSLHSLLSRSDALPETAQGVREASVAWKKLLSTFEEDKATRTSKVDSPENQNCPFSVTTLGKTVPESGIALELPCGLVIDSSITLIGIPIGQNSSFQIDLTGQELEEKPNPPVVLHYNVSFPGDNMTEEPYIVQNTWTSDFGWGKEERCPAHGSANIQKVDGLVLCNVQVVGSSNEENVTVGQPTSDITSNISSESAHRTANFPFAEGNPFTATLWVGSEGFHMTVNGRHETSFAYREKLEPWLVSNIKVAGNLNILSILAKGLPVTEDNDIIVDVDKLEAPPIPKKRLVLLIGVFSTGNNFERRMALRRSWMQYEAVRSGEVAVRFFIGLHKNNRVNFELWREAQAYGDIQLMPFVDYYSLITLKTIAICIMGTKIIPSKYIMKTDDDAFVRIDEVLSSLKGKPSEGLLFGLISSQSTPQRDKNSKWYISEKEWPHDTYPPWAHGPGYVLSRDIAKFIVHGHQERKLKLFKLEDVAVGIWIEQFKKGGKEVHYANDERFYNVGCESNYVLAHYQSPRMVLCLWEKLQKEHKPECCE* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2535 651 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 87 642 IPR002659 GO:0006486|GO:0016020|GO:0016758
Dod05g2535 651 SUPERFAMILY Concanavalin A-like lectins/glucanases 185 376 IPR013320 -
Dod05g2535 651 Coils Coil 650 651 - -
Dod05g2535 651 Gene3D - 177 374 - -
Dod05g2535 651 CDD GLECT 185 373 IPR001079 GO:0030246
Dod05g2535 651 Pfam Galactoside-binding lectin 184 374 IPR001079 GO:0030246
Dod05g2535 651 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 183 376 IPR001079 GO:0030246
Dod05g2535 651 Pfam Galactosyltransferase 417 599 IPR002659 GO:0006486|GO:0016020|GO:0016758
Dod05g2535 651 Gene3D - 399 620 - -
Dod05g2535 651 SMART Gal_bind_lectin_2 187 375 IPR001079 GO:0030246
Dod05g2535 651 PANTHER - 87 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2535 Dod-Chr5 51620280 51626033 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2535 12 651 Glycosyltransferase AT3G06440 50.698 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2535 K20843 - gmx:100816729 1079.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2535 05 51620280 51626033 Dod05g2535 05 51620280 51626033 ECH
Dod05g2535 05 51620280 51626033 Dod02g1653 02 20570018 20576886 PCT