Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2522 ATGGCGTCCCAAAGGCCTAACTTTACACTCGCACAGCATCTTCTGCTCAACTCGCCAACTACCCATTTCGTACTCGTTCCTTCTTCGGAGTTTGTAACTGTCTCTCTGCTTTTTCTACCTCCCAAGCTAGTAAAGATGGCATCAGAGACTTTCCTTTTCACCTCCGAATCAGTGAACGAGGGACACCCCGACAAGCTCTGTGACCAAATCTCCGATGCTGTGCTCGATGCCTGCTTGCAACAGGACCCAGACAGCAAGGTTGCATGTGAAACCTGCACCAAGACCAACATGGTCATGGTCTTTGGAGAGATCACAACCAAGGCCAACGTAGACTATGAGAAGATTGTCCGTGATACCTGCAGGAACATTGGATTTGTTTCCAATGATGTTGGTCTTGATGCTGACCACTGCAAGGTCCTTGTCAACATTGAGCAACAAAGCCCTGATATTGCTCAGGGTGTCCATGGCCATCTCACAAAGAGGCCTGAGGAAATTGGTGCTGGTGACCAAGGTCATATGTTTGGCTATGCCACTGATGAGACCCCCGAATTGATGCCCTTGAGCCATGTTCTCGCAACCAAACTTGGTGCTCGCCTCACCGAAGTTCGCAAGAATGGAACCTGCCCTTGGTTGAGGCCTGATGGCAAGACCCAAGTCACTGTTGAGTACTTCAATGACAAGGGTGCCATGGTTCCACTCCGTGTCCACACCGTGCTCATCTCAACTCAGCATGATGAGACTGTCACCAATGATGAAATTGCTGCTGATCTCAAAGAGCATGTCATCAAGCCTGTGATTCCCGAGAAGTACCTTGATGAGAAGACCATCTTCCACTTGAACCCCTCAGGCAGATTCGTCATCGGTGGACCCCACGGCGATGCCGGTCTAACTGGCCGCAAGATCATCATTGACACTTATGGTGGATGGGGTGCACATGGTGGTGGCGCCTTCTCAGGAAAGGACCCAACCAAGGTGGACAGGAGTGGAGCCTACATTGTGAGGCAGGCTGCTAAGAGCATTGTGGCCAGTGGACTTGCAAGGAGGTGCATTGTGCAAGTGTCCTATGCCATTGGTGTGCCTGAGCCTTTGTCTGTGTTTGTTGACTCATATGGCACTGGGAAGATCCCTGACAAGGAGATCCTCAACATTGTGAAGGAAAACTTTGACTTCAGGCCAGGAATGATCTCTATCAACCTTGATCTCAAGAGGGGTGGCAACAACAGGTTCTTGAAGACTGCTGCTTATGGACACTTTGGAAGGGATGACTCTGACTTCACATGGGAGGTGGTGAAGCCCCTCAAGTGGGAGAAAGCCTAG 1317 0.5049 MASQRPNFTLAQHLLLNSPTTHFVLVPSSEFVTVSLLFLPPKLVKMASETFLFTSESVNEGHPDKLCDQISDAVLDACLQQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRNIGFVSNDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYFNDKGAMVPLRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILNIVKENFDFRPGMISINLDLKRGGNNRFLKTAAYGHFGRDDSDFTWEVVKPLKWEKA* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2522 438 Pfam S-adenosylmethionine synthetase, C-terminal domain 287 428 IPR022630 GO:0004478|GO:0006556
Dod05g2522 438 SUPERFAMILY S-adenosylmethionine synthetase 50 156 IPR022636 GO:0004478|GO:0006556
Dod05g2522 438 TIGRFAM metK: methionine adenosyltransferase 52 433 IPR002133 GO:0004478|GO:0005524|GO:0006556
Dod05g2522 438 Gene3D - 164 428 - -
Dod05g2522 438 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 49 438 IPR002133 GO:0004478|GO:0005524|GO:0006556
Dod05g2522 438 CDD S-AdoMet_synt 52 431 - -
Dod05g2522 438 Gene3D - 58 326 - -
Dod05g2522 438 PIRSF MAT 45 438 IPR002133 GO:0004478|GO:0005524|GO:0006556
Dod05g2522 438 ProSitePatterns S-adenosylmethionine synthase signature 1. 166 176 IPR022631 GO:0004478|GO:0006556
Dod05g2522 438 ProSitePatterns S-adenosylmethionine synthase signature 2. 313 321 IPR022631 GO:0004478|GO:0006556
Dod05g2522 438 SUPERFAMILY S-adenosylmethionine synthetase 162 286 IPR022636 GO:0004478|GO:0006556
Dod05g2522 438 Gene3D - 51 289 - -
Dod05g2522 438 SUPERFAMILY S-adenosylmethionine synthetase 287 435 IPR022636 GO:0004478|GO:0006556
Dod05g2522 438 Pfam S-adenosylmethionine synthetase, N-terminal domain 51 148 IPR022628 GO:0004478|GO:0006556
Dod05g2522 438 Pfam S-adenosylmethionine synthetase, central domain 164 285 IPR022629 GO:0004478|GO:0006556
Dod05g2522 438 PANTHER S-ADENOSYLMETHIONINE SYNTHASE 4 49 438 - -
Dod05g2522 438 Hamap S-adenosylmethionine synthase [metK]. 49 437 IPR002133 GO:0004478|GO:0005524|GO:0006556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2522 Dod-Chr5 51457240 51459429 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2522 K00789 - gmx:100799139 770.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2522 05 51457240 51459429 Dod05g2522 05 51457240 51459429 ECH
Dod05g2522 05 51457240 51459429 Dod01g3210 01 73034538 73038097 ECH