Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2420 ATGTTGAATCTTGCCGACATTGTTTCCAATTTGGCATCTAATTTCTTCCTCATTCAGCAAAGTTTAAAGTTCCCTTTTGTCTGCTTTCTCGGAGGCCCCGCAAGGATGAAGGCAGGCTTTAATGGGTTAAGGGGTAAAGAAATTTCTCTTATTTCCATTGTTCTCATGTCTGCGACTATCATTTTATGGTCATGGGAGAAAACACCCCGTCTTACTACCTTTTCTCCTCCTCAAGAAGCATCAATGCAGCTGTCTTCAGAAATTCTTTCAAGTAGATCAGATGAAGTAGCAAAATATGAACGAATCTCGGAAGCTGGGAAAAATGATGGCGTACAAACTTTGTCTAGTTCGACAATATCTAAGGCTGAAAAGAATGAAACAGAGGGGGAGAAAACTTCAAAACAAGAAGAACATAGAAAAGATTCTGTAAAGGAATCTCCCCAAAGAAGCTCTTCAATTGAAGGAAAAGACAAGATTTGGAATAATGTTACAGAAACTAAAGCCTGTAACTATGCAAAAGGAAAATGGGTTCAAGACAACAACCGGCGGCCGCTGTATTCAGGATTTCATTGCAAACAGTGGCTGTCACCTATGTGGGCTTGCCGCTTGATGCAACGTACTGATTTTGCTTATGAGAAGCTCCGGTGGCAGCCAAAAGATTGTCAAATGGAGGAATTTGAAGGTTCTAAATTTTTTAGAAGGATGCAAAACAAAACTCTAGCTTTTGTTGGAGACTCATTGGGCCGGCAGCAGTTCCAGTCTTTGATGTGCATGATCACTGGTGGTAAGGAGGTGCCTGATGTGGAAGACGTGGGTGCAGAGTATGGATTGGCTATAACTGAGGGCTCTGCCCGCCCTGGTGGGTGGGCTTACCGTTTCCCCAGCACCAATACTACTATCCTCTACTACTGGTCAGCAAGCCTGTGTGATATTGAACCTATTGATGTGAAAAACCCAAACACGGACTATGCAATGCACCTTGATCGGCCACCAGCATTCTTGCGCCAATATCTCCATAAGTTTGATGTACTGGTTCTCAACACAGGTCACCACTGGAATCGAGGTAAGCTTAAGGCTAATCGATGGGTAATGTATGTTGGGGGCATGCCAACTACCAATAGGAAGATACAAGTGATTTGGGCTGCCAAGAATCTTACAATTCACAGCGTCGTTAGTTGGGTCAATTCACAGCTTCCAAAGTATCCAGGCTTAAAGGCATTCTTCCGGTCCATTTCTCCTAGGCATTTTGTTGGCGGGGAGTGGAACACTGGAGGCAGTTGTGACAACACTACACCAATGTCAGTAGGAAAGGAAATATTGGACGAGGAGTCCAGTGATCAAGGTGCTGCAAGCGCAGTGAAAGGAACACGGGTGAAGCTCTTGGACATAACAGCTATTTCTCAGCTAAGGGATGAGGGTCATATATCACGGTTCAGCATCACAGCGAAGGCTGGTGTGCAGGACTGCTTACACTGGTGTTTGCCTGGTGTTCCTGATACATGGAACGAAATACTCTTTGCACAAATCTAG 1530 0.4444 MLNLADIVSNLASNFFLIQQSLKFPFVCFLGGPARMKAGFNGLRGKEISLISIVLMSATIILWSWEKTPRLTTFSPPQEASMQLSSEILSSRSDEVAKYERISEAGKNDGVQTLSSSTISKAEKNETEGEKTSKQEEHRKDSVKESPQRSSSIEGKDKIWNNVTETKACNYAKGKWVQDNNRRPLYSGFHCKQWLSPMWACRLMQRTDFAYEKLRWQPKDCQMEEFEGSKFFRRMQNKTLAFVGDSLGRQQFQSLMCMITGGKEVPDVEDVGAEYGLAITEGSARPGGWAYRFPSTNTTILYYWSASLCDIEPIDVKNPNTDYAMHLDRPPAFLRQYLHKFDVLVLNTGHHWNRGKLKANRWVMYVGGMPTTNRKIQVIWAAKNLTIHSVVSWVNSQLPKYPGLKAFFRSISPRHFVGGEWNTGGSCDNTTPMSVGKEILDEESSDQGAASAVKGTRVKLLDITAISQLRDEGHISRFSITAKAGVQDCLHWCLPGVPDTWNEILFAQI* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2420 509 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 225 507 IPR026057 GO:0016740
Dod05g2420 509 MobiDBLite consensus disorder prediction 110 156 - -
Dod05g2420 509 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 14 39 509 - -
Dod05g2420 509 PANTHER N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE 39 509 - -
Dod05g2420 509 MobiDBLite consensus disorder prediction 123 152 - -
Dod05g2420 509 Pfam PMR5 N terminal Domain 168 222 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2420 Dod-Chr5 50511269 50518988 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2420 - - gmx:100788136 723.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2420 05 50511269 50518988 Dod03g1591 03 21800531 21808874 PCT