Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2408 ATGGTCCCAAACAACGAAAATCCCCCCAACACCCACCCCTCTCCCACTCCGTCTTCCTCGGCTCAATTTCAATCTCCGTTGTTTCCCCCACTCATGACTCCGACTACCCCTAACCCCAATCTCGATTTTCTTCAATTCCCGATCACCCACCCCATTCCCAACTTTGCCGATGATGATTGCACCCAAACTAGGGATTTGGAGTTTGACAACACCACTTCCATGACGATCTTCCCTCACACCCAAACCCAACCGCCACGTGTCCCTCACTGGCTTCACCAACAACATACCCCCCTTCATTCCCTCCCCACTGAGATTGGGCTCCCCGACCAAGACGAATTTCACATTGACCGATTTGTTGCCCAATTCCTCAAAAACAACTACAGCCCTAACTCCGACTTCCCCGATCCTCTATTACCTGGAACATCATCATCATCCAACGGCCCTGATGATGATGAAAGAGACAAAGGCTTTCTCAAAAGAGGAACCGTTGATTATCTCGGGATTGGCTTATCCATCGACGGTCATAATGCCACTCCCAAGCGAACCAAGACCACAACAACCACTGGAGGAGGAGGAGGAGGACTACATGACGGAAATCTCAATTTTGGTTTTGAATCCCCTTCTGCTTCCGAGCAGGATCAAGGTGATCGGAAAGGAAAGAGGAAGCTGTATGATCATCATGTTACTGATACTAACGGCGCTGGCGAAAGGGTTGTTGTAATTGTTGATGATGACGACGAGAATGAAGGTGATGATGTTCTGAGGAGGTTCAGCAGAGAAGCGAAACTGAAGGAACCCGTGATTGAATTTGATTTCTTGTCTGATGCTTTTAATGGTGATGCATTCCGAGCACAAATTCCGGACAATTCAAATTTCGACGTTGACCTTTTAGTGGATGATGACTATGCTGCCCACCTCCAACAAGGTGCTGGCTCAAGAAGGAGGGAACGTTTCAGGGACATAGCTAAGGAGAATGCATCTCGGTTCGCTCGATTCGAGCCCGATGCTGAAGATAATAAAGATGGTGGTGTTGGATCATCATCTTCTTCTCCTGAGACTCAAGTTGAGCCTCCAATTGATGAGGGACCAACCCCTTTTTCTGTAGCTATGAAGTCTTTGAAAGAAAAGGGGGTGAAAAATGTGCAAACTAAATCTTGGGTTCCTAAAAGGAATGAGCAAGATATGATGGGGGCAAGGCTTTCAGTGCCCCCTTCATTGAAAGAACTGTGCCTTAAGATTCTTGCAAACAACGCTGATGCAATTGTGTCACTTGATGGTGTCCCTGATGATCTGAGACACAGGCTTAGCCAGTTGTTATGCGACTCTCGGAAAATGAACAGCCACTCTTTTGAACTTCTTGTTAGTGGGTCTCCTACCGAGATTCGCCTGAGAGATTGCTCATGGTTGTCTGAGGAACAGTTTTTGAAATCTTTTAAAGCGTGCAACACTGCCAAGTTGGAGGTGCTACAACTTGACCAGTGTGGACACTGTATACCTGATTATATTTTGGACCAGCCTCCAAGGTGGTTACATTTACCCAGATTAACTAGTCTGTCCCTCAGTGGTGCATGCCGTCTTTCAGATAAGGGGTTAAGTGTGCTAGTTTCTTCTGCCCCAGTGCTTAGATCGATAAATCTAAGCCAGTGCTCCCTTCTCACATCTGCCAGTATTGATACTTTGGCCGACTCGTTAGGATCACTTCTGAAAGAGTTGTATCTTGATGATTGCCTAAGCATTGATGCGGCACAAATTGTGCCAGCACTAAAGAAACTTGAACATATAGAAGTTTTGTCGTTGTCTGGCATGCAAAATGTTTGTGATAAATTTATCAAGGACTACATCATTGCACGTGGTCACAACATGAAGGAGCTTGTTTTAAAGGACTGTGGAAAGTTGACTGATGTGTCAATGAAAGTCATTGCTGATCACTGTCCTGGGTTGTGTGTGCTTGATCTGATGAACTTGTGCAAATTGACAGGATTTATCTATAGGATATCTCGCCAATAG 2007 0.4579 MVPNNENPPNTHPSPTPSSSAQFQSPLFPPLMTPTTPNPNLDFLQFPITHPIPNFADDDCTQTRDLEFDNTTSMTIFPHTQTQPPRVPHWLHQQHTPLHSLPTEIGLPDQDEFHIDRFVAQFLKNNYSPNSDFPDPLLPGTSSSSNGPDDDERDKGFLKRGTVDYLGIGLSIDGHNATPKRTKTTTTTGGGGGGLHDGNLNFGFESPSASEQDQGDRKGKRKLYDHHVTDTNGAGERVVVIVDDDDENEGDDVLRRFSREAKLKEPVIEFDFLSDAFNGDAFRAQIPDNSNFDVDLLVDDDYAAHLQQGAGSRRRERFRDIAKENASRFARFEPDAEDNKDGGVGSSSSSPETQVEPPIDEGPTPFSVAMKSLKEKGVKNVQTKSWVPKRNEQDMMGARLSVPPSLKELCLKILANNADAIVSLDGVPDDLRHRLSQLLCDSRKMNSHSFELLVSGSPTEIRLRDCSWLSEEQFLKSFKACNTAKLEVLQLDQCGHCIPDYILDQPPRWLHLPRLTSLSLSGACRLSDKGLSVLVSSAPVLRSINLSQCSLLTSASIDTLADSLGSLLKELYLDDCLSIDAAQIVPALKKLEHIEVLSLSGMQNVCDKFIKDYIIARGHNMKELVLKDCGKLTDVSMKVIADHCPGLCVLDLMNLCKLTGFIYRISRQ* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2408 668 MobiDBLite consensus disorder prediction 1 40 - -
Dod05g2408 668 SMART LRR_CC_2 538 563 IPR006553 -
Dod05g2408 668 SMART LRR_CC_2 618 643 IPR006553 -
Dod05g2408 668 SMART LRR_CC_2 512 537 IPR006553 -
Dod05g2408 668 PANTHER UNCHARACTERIZED 272 659 - -
Dod05g2408 668 MobiDBLite consensus disorder prediction 329 366 - -
Dod05g2408 668 MobiDBLite consensus disorder prediction 130 156 - -
Dod05g2408 668 PANTHER F-BOX/LRR PROTEIN 272 659 - -
Dod05g2408 668 MobiDBLite consensus disorder prediction 1 15 - -
Dod05g2408 668 MobiDBLite consensus disorder prediction 130 146 - -
Dod05g2408 668 SUPERFAMILY RNI-like 457 662 - -
Dod05g2408 668 Gene3D Ribonuclease Inhibitor 368 661 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2408 Dod-Chr5 50358420 50363208 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2408 K15082 - gmx:100798274 458.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2408 05 50358420 50363208 Dod05g2408 05 50358420 50363208 ECH
Dod05g2408 05 50358420 50363208 Dod03g1570 03 21454695 21459041 PCT