Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2390 ATGGCTTCAACTTCAGCAGTTTCAATGGCTATGCCACTAACATACGCCAGCCAGAAGAGGGTGGTGGTGCCCAGCTCTGAGGCATTGTTCAAGGCACCATTGCCTCTGCGGCCTTCAAAGGCTGTGGCAGCATCAGAACCAAGAGGAAGGTTTCAAGTGAAGGCCTCCATGAAGGAGAAAGTTGTGACAGGGCTCACGGCAGCTGCATTGACAGCTCAAATGATGGTTCCTGATGTGGCTGAAGCTGCTGTGACTCCTTCTCTCAAGAACTTCTTGCTCAGCATCCTGGCTGGTGGAGTTGTGGCTGGAGTCATTGTTGGTGCCGTCATCGGTGTCGCCAATTTCGATCCTGTCAAGCGAAGCTGA 366 0.5273 MASTSAVSMAMPLTYASQKRVVVPSSEALFKAPLPLRPSKAVAASEPRGRFQVKASMKEKVVTGLTAAALTAQMMVPDVAEAAVTPSLKNFLLSILAGGVVAGVIVGAVIGVANFDPVKRS* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2390 121 PANTHER EXPRESSED PROTEIN 1 121 - -
Dod05g2390 121 PANTHER OS07G0673550 PROTEIN 1 121 - -
Dod05g2390 121 Pfam Photosystem II reaction centre X protein (PsbX) 84 121 IPR009518 GO:0009523|GO:0015979|GO:0016020
Dod05g2390 121 Gene3D Single helix bin 83 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2390 Dod-Chr5 50167010 50168373 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2390 - - gmx:100306291 171.014
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2390 05 50167010 50168373 Dod05g2390 05 50167010 50168373 ECH
Dod05g2390 05 50167010 50168373 Dod03g1558 03 21218377 21218742 PCT