Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2358 ATGAGCAACGACAAGGACACCTTCAGCGTTGCGGATCTCACATCTGCTCTCAATGAGGAGAACAGAGCCGACCTTGTCAATGCTCTCAAGAGCAAGATACAGAGTCTGGCAGGGCAGCACTCCGATGTTTTGGAGTCATTGGCACCCAATGTCAGGAAGCGGGTCGAGGTTCTCAGAGAGATCCAGGGTCAACATGATGAATTGGAAGCAAAATTTTTTGAGGAGAGAGCAGCTCTTGAGGCCAAGTACCAAAAATTGTATCAACCACTGTATACAAAGCGCTTTGACATAGTAAATGGTGTTACTGAAGTTGAAGGGGTAGCAGATGAAAAAAGTGCTGATACTGAAGAGGAGGATAAAGAAAAAGGAGTTCCTGCTTTTTGGCTTACCGCAATGAAAAATAATGAAGTGTTAGCTGAGGAGATTTCAGAGCGTGATGAAGGTGCTCTCAAGTATATCAAAGACATCAAGTGGAGCAGGATAGAAAACCCTAAAGGATTCAAGCTTGAATTTTTCTTTGAGACCAATCCATATTTTACAAATTCCGTCTTGGCGAAAACATATCATATGATTGATGAGGATGAGCCGATATTGGAGAAAGCAATTGGGACTGACATTCAATGGCACCCTGGAAAATGCTTGACACAGAAGATTCTTAAGAAAAAGCCTAAGAAGGGTTCAAAGAATGCTAAACCAATTACCAAAACTGAAACTTGTGAAAGTTTCTTCAATTTCTTCAATCCACCACAAGTTCCCGATGATGATGAAGACATTGATGAAGATTTGGCTGAGGAACTTCAGAATCAAATGGAGCAAGACTATGACATTGGGTCCACCATAAGAGATAAAATTATCCCCCATGCTGTGTCATGGTTTACTGGGGAGGCCATTCAGGGAGAGGAGTTTGGAGACCTGGAGGAGGAGGATGATGATGATATTGAAGAGGATGATGATGAAGAGGAGGATGACGACGAAGAAGATGACGATGAGGATGATGAGGAGGAGGAGGAAGAAACTAAGACTAAAAAGAAGTCATCAGCACATAAGAAGAGTGGAAGAGCTCAGCTTGGTGATGGTCAGCAGGGTGAACGACCTCCAGAGTGCAAGCAGCAGTAG 1116 0.4328 MSNDKDTFSVADLTSALNEENRADLVNALKSKIQSLAGQHSDVLESLAPNVRKRVEVLREIQGQHDELEAKFFEERAALEAKYQKLYQPLYTKRFDIVNGVTEVEGVADEKSADTEEEDKEKGVPAFWLTAMKNNEVLAEEISERDEGALKYIKDIKWSRIENPKGFKLEFFFETNPYFTNSVLAKTYHMIDEDEPILEKAIGTDIQWHPGKCLTQKILKKKPKKGSKNAKPITKTETCESFFNFFNPPQVPDDDEDIDEDLAEELQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAIQGEEFGDLEEEDDDDIEEDDDEEEDDDEEDDDEDDEEEEEETKTKKKSSAHKKSGRAQLGDGQQGERPPECKQQ* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2358 371 PANTHER NUCLEOSOME ASSEMBLY PROTEIN 1,2 1 371 - -
Dod05g2358 371 MobiDBLite consensus disorder prediction 300 336 - -
Dod05g2358 371 MobiDBLite consensus disorder prediction 295 371 - -
Dod05g2358 371 Gene3D Nucleosome assembly protein 119 295 - -
Dod05g2358 371 Gene3D - 45 104 - -
Dod05g2358 371 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 1 371 IPR002164 GO:0005634|GO:0006334
Dod05g2358 371 SUPERFAMILY NAP-like 30 294 IPR037231 -
Dod05g2358 371 Pfam Nucleosome assembly protein (NAP) 53 295 IPR002164 GO:0005634|GO:0006334
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2358 Dod-Chr5 49897572 49900948 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2358 K11279 - gmx:100818687 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2358 05 49897572 49900948 Dod05g2358 05 49897572 49900948 ECH
Dod05g2358 05 49897572 49900948 Dod03g1508 03 20598886 20602683 PCT