Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2345 ATGATACCGATATCAGCTCTCTTAGCCACCTGGTTCACACCCTCTTCCCTCTTCATCGTCGTTAACCTCGTCATCGGTACCATTGCTGTCACTTCCCGCTTCACCTCCCCCAAGAGACAAACCCATCACGACTCTGACCTCGGACCCCAACTCGTTCGCTCACCCTCTCTTCTAGAACGAGTCAGGTCCTTTAGACTCAACCACTACACCTACAACTACGAGCCAACAACAGCAGCGCTTTCGGAAACCGAGTCCACTCATCCCCAACTCGTTCGGACACCGTCCCTTTTGGAACGAGTCAGGTCCTTTAAACTCGGCCACTACACCTACAACTACGAGCCAACACTTTCGGAACCGGCCGAGTGCACTCAGCCCCAACTCGTTCGCACACCGTCTCTTTTGGAGCGAGTGAGGTCCTTCAATTTCGGCCTCCACAACCACGAAACTGATGAGCATGTCCAGGTCCAGGCCCATCAACCCGAACCCGAAGACCCCAAAGAGCCGCACCTGGCTCGGGCTCCTTCGCTCTTGCAGCGGCTTCACTCAGTGAGCTTCTCGCGCATCTACAGGCCCGACAGTGTACACCAAGATGAACAGCCCGAACCCGAATCCTATGGACCGGGTGGCGGTTCGGGTGTGAAGGAGGTGGCGGAGATGATGAGGAAATCGGCGAGTGACAGGGCGCGTGGGGTGAAGTGCGAGTGGGAGGAAGATGAAGAGACTGTTGAGAAGCGGAGGCCGGAAAGTGCGAGGTTCGAAACGACTTCGTCGTTGAGGGAGGACGACGAAGAGGTTGATGCGAAGGCTGATGATTTCATCAACAGGTTCAAGAAGCAGCTGAGGTTGCAGAGGATTGACTCCATTCTCCGTAACAGGGAGATGCTCAGAGGAAATTGA 897 0.553 MIPISALLATWFTPSSLFIVVNLVIGTIAVTSRFTSPKRQTHHDSDLGPQLVRSPSLLERVRSFRLNHYTYNYEPTTAALSETESTHPQLVRTPSLLERVRSFKLGHYTYNYEPTLSEPAECTQPQLVRTPSLLERVRSFNFGLHNHETDEHVQVQAHQPEPEDPKEPHLARAPSLLQRLHSVSFSRIYRPDSVHQDEQPEPESYGPGGGSGVKEVAEMMRKSASDRARGVKCEWEEDEETVEKRRPESARFETTSSLREDDEEVDAKADDFINRFKKQLRLQRIDSILRNREMLRGN* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2345 298 Pfam Domain of unknown function (DUF4408) 7 34 IPR025520 -
Dod05g2345 298 PANTHER DUF4408 DOMAIN PROTEIN 4 71 - -
Dod05g2345 298 PANTHER DUF4408 DOMAIN PROTEIN 215 297 - -
Dod05g2345 298 MobiDBLite consensus disorder prediction 219 264 - -
Dod05g2345 298 Pfam Cotton fibre expressed protein 262 296 IPR008480 -
Dod05g2345 298 MobiDBLite consensus disorder prediction 191 264 - -
Dod05g2345 298 PANTHER COTTON FIBER (DUF761) 4 71 - -
Dod05g2345 298 PANTHER COTTON FIBER (DUF761) 215 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2345 Dod-Chr5 49738992 49740131 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2345 - - var:108322704 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2345 05 49738992 49740131 Dod05g2345 05 49738992 49740131 ECH
Dod05g2345 05 49738992 49740131 Dod03g1498 03 20104175 20105288 PCT