Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2337 ATGATCACAAAGCCATTCTTGTTAATGGCCACAGAAGGATATTGGTTTCCTGGCTCCATACACTATCCAAGAAGCACACCTGAGATTTGGCCGGACCTCATTCAAAAGGCCAAAGATGGAGGCTTAGATGTTATACAAACCTATGTGTTTTGGAATGGACATGAACCTTCTCCTGGGAAGTATTATTTTGAGGATAGGTACGACTTAGTTAAGTTCATCAAGCTGGTACAGCAAGCCGGCCTTTATGTTAATCTCCGCATTGGTCCTTACATATGTGCTGAATGGAATTTTGGGGGATTTCCTGTTTGGCTCAAGTACGTCCCGGGTATTGCTTTCAGAACAGACAATGAGCCTTTCAAGTCAGCAATGCAAAAATTCACTGAGAAGATTGTGAGTATGATGAAGGCAGAGAAGTTGTTTCAGACGCAGGGAGGTCCAATAATTCTGTCTCAGATAGAGAACGAGTTTGGACCAGTGGAGTGGGAAATTGGTGCTCCTGGAAAAGCTTACACGAAATGGGCTGCTCAAATGGCTGTTGGTCTAGACACTGGCGTCCCTTGGATTATGTGCAAGCAAGAAGATGCCCCTGATCCTGTTATTGACACCTGGAATGGGTTTTACTGTGAGAATTTCACCCCCAACAAGAACTACAAACCAAAAATGTGGACAGAGAACTGGACAGGCTGGTACACTGAGTTTGGCGGTGCAGTCCCTACTAGACCAGCAGAAGACATTGCATTCTCAGTTGCCAGATTCATACAAAAAGGTGGCTCATTTATTAACTACTATATGTATCATGGAGGAACCAACTTTGAGCGGACATCCGGTGGCCCCTTCATTGCCACCAGCTATGACTATGATGCTCCAATTGATGAATTCGGACTTCTAAATGAACCGAAATGGGGACATTTGAGAGATTTGCACAAAGCAGTAAAGCTCTGTGAACCGGCTTTGGTGTCTGTAGATCCTACGGTGACATCGCTTGGAAATAACCTTGAGGCACATGTGTTCAAGACAGCCGGTGCTTGTGCTGCATTCCTTGCAAATCATGATACCAAATCTTCTGCAAAAGTTACGTTTGGAAATGGAAAATATGACCTACCACCTTGGTCTATCAGCATTCTTCCTGACTGCAAAACTGCAGTCTTCAACACTGCAAGGCTTGGTGCTCAGAGCTCCCAGAAGAAGATGACTTCTGTAAACAGTGCATTTGATTGGGAGTCATACAATGAAGAACCTGCATCATCCAGTGAAGATGATCCTATCACAGCAGATGCACTGTGGGAACAGATTAATATCACCCGAGATTCTACAGATTATTTGTGGTATATGACAGATGTCAACATTGATCCTAGTGAACGTTTTATAAAGAGTGGACAATGGCCTCATATTACCATAATGTCAGCAGGCCATGCTTTGCATGTCTTCATTAATGGTCAACTTTCAGGAACCGTGTACGGGGGATTGGAGTTTCCTAAATTAACATTTAGTGGCAATGTTAATCTGAAGGTTGGAAATAACAAGATTTCTTTACTTAGTATTGCTGTGGGTCTCCCGAATGTTGGCACACACTTTGAGACTTGGAATGCTGGTGTGTTAGGCCCGGTCACACTTGCGGGTCTAAATGAGGGGACCAGAGACTTGTCTCACCAGAAATGGTCTTACAAGATTGGTCTGAAAGGTGAAGCCTTAAGCCTTCACACTGTAAGTGGGAGTGGCTCTGTTGAATGGGAACAAGGATCATTATTGGCTAAAAAACAACCTTTGACATGGTACAAGACAACTTTTAGCACACCAGAAGGCAATGATCCATTGGCTCTAGATATGATCAGCATGGGAAAAGGTCAAGTATGGATAAATGGTCGGAGCATTGGACGCCATTGGCCTGGATACATAGCACACGGTAATTGTCGGGATTGTTATTATGCTGGAACTTACACTGACAAAAAATGCAGGACGAATTGTGGACAACCCTCCCAGAGATGGTACCATGTTCCTCGGTCGTGGCTGAACCCAAGTGGGAATTATCTGGTTGTGTTTGAAGAGTGGGGTGGCGACCCTACTGGAATTTCCTTGGTGAAAAGAACAACAGCAAGCGTGTGTGCTGATATATATGAAGGGCAGCCAACTCTAAAGAACAGGCAGATGCTGGACTCTGGGAAAGTTATTAGACCCAAAGCTCACTTGTGGTGTCCACCAGGGCAAAAGATCTCCCAGATTAAGTTTGCTAGCTATGGATTGCCACAGGGAGCTTGTGGAAGCTTTCAAGAGGGCAGCTGTCATGCTCACAAATCATATGATGCTCCTCAAAGGAACTGCATTGGCAAGCAATCTTGCATGGTCACTGTAGCTCCTGAAGTTTTTGGGGGAGACCCATGTCCAGGAACTGCAAAGAAGCTGTCAATTGAGGCCCTATGCGGATAG 2424 0.4476 MITKPFLLMATEGYWFPGSIHYPRSTPEIWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGKYYFEDRYDLVKFIKLVQQAGLYVNLRIGPYICAEWNFGGFPVWLKYVPGIAFRTDNEPFKSAMQKFTEKIVSMMKAEKLFQTQGGPIILSQIENEFGPVEWEIGAPGKAYTKWAAQMAVGLDTGVPWIMCKQEDAPDPVIDTWNGFYCENFTPNKNYKPKMWTENWTGWYTEFGGAVPTRPAEDIAFSVARFIQKGGSFINYYMYHGGTNFERTSGGPFIATSYDYDAPIDEFGLLNEPKWGHLRDLHKAVKLCEPALVSVDPTVTSLGNNLEAHVFKTAGACAAFLANHDTKSSAKVTFGNGKYDLPPWSISILPDCKTAVFNTARLGAQSSQKKMTSVNSAFDWESYNEEPASSSEDDPITADALWEQINITRDSTDYLWYMTDVNIDPSERFIKSGQWPHITIMSAGHALHVFINGQLSGTVYGGLEFPKLTFSGNVNLKVGNNKISLLSIAVGLPNVGTHFETWNAGVLGPVTLAGLNEGTRDLSHQKWSYKIGLKGEALSLHTVSGSGSVEWEQGSLLAKKQPLTWYKTTFSTPEGNDPLALDMISMGKGQVWINGRSIGRHWPGYIAHGNCRDCYYAGTYTDKKCRTNCGQPSQRWYHVPRSWLNPSGNYLVVFEEWGGDPTGISLVKRTTASVCADIYEGQPTLKNRQMLDSGKVIRPKAHLWCPPGQKISQIKFASYGLPQGACGSFQEGSCHAHKSYDAPQRNCIGKQSCMVTVAPEVFGGDPCPGTAKKLSIEALCG* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2337 807 SUPERFAMILY Galactose-binding domain-like 372 542 IPR008979 -
Dod05g2337 807 Pfam Beta-sandwich domain in beta galactosidase 318 387 IPR041392 -
Dod05g2337 807 Gene3D - 405 554 - -
Dod05g2337 807 ProSiteProfiles SUEL-type lectin domain profile. 721 807 IPR000922 GO:0030246
Dod05g2337 807 Gene3D - 561 701 - -
Dod05g2337 807 PRINTS Glycosyl hydrolase family 35 signature 30 48 IPR001944 GO:0004553|GO:0005975
Dod05g2337 807 PRINTS Glycosyl hydrolase family 35 signature 9 26 IPR001944 GO:0004553|GO:0005975
Dod05g2337 807 PRINTS Glycosyl hydrolase family 35 signature 85 104 IPR001944 GO:0004553|GO:0005975
Dod05g2337 807 PRINTS Glycosyl hydrolase family 35 signature 278 294 IPR001944 GO:0004553|GO:0005975
Dod05g2337 807 PRINTS Glycosyl hydrolase family 35 signature 142 157 IPR001944 GO:0004553|GO:0005975
Dod05g2337 807 PRINTS Glycosyl hydrolase family 35 signature 258 273 IPR001944 GO:0004553|GO:0005975
Dod05g2337 807 PRINTS Glycosyl hydrolase family 35 signature 614 630 IPR001944 GO:0004553|GO:0005975
Dod05g2337 807 PRINTS Glycosyl hydrolase family 35 signature 221 236 IPR001944 GO:0004553|GO:0005975
Dod05g2337 807 PRINTS Glycosyl hydrolase family 35 signature 587 601 IPR001944 GO:0004553|GO:0005975
Dod05g2337 807 Gene3D Glycosidases 5 315 - -
Dod05g2337 807 Pfam Glycosyl hydrolases family 35 15 310 IPR031330 -
Dod05g2337 807 PANTHER BETA-GALACTOSIDASE 17 696 - -
Dod05g2337 807 PANTHER BETA-GALACTOSIDASE RELATED 17 696 IPR001944 GO:0004553|GO:0005975
Dod05g2337 807 Pfam Galactose binding lectin domain 729 806 IPR000922 GO:0030246
Dod05g2337 807 SUPERFAMILY Galactose-binding domain-like 552 711 IPR008979 -
Dod05g2337 807 Gene3D - 721 807 IPR043159 -
Dod05g2337 807 SUPERFAMILY (Trans)glycosidases 14 315 IPR017853 -
Dod05g2337 807 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 144 156 IPR019801 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2337 Dod-Chr5 49651350 49657007 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2337 18 806 Glycoside Hydrolase AT3G13750 71.195 0.0 1202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2337 - - gmx:100810170 1516.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2337 05 49651350 49657007 Dod05g2337 05 49651350 49657007 ECH
Dod05g2337 05 49651350 49657007 Dod03g1493 03 19948372 19955187 PCT