Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1852 ATGGATTCTGACGAAGAAGATTTTGTGTTCTACGGAACGCCGATAGAGCGAGAGGAAGAGTTAAGCAGCCGTAAGAAGAAGGCCATTGCTGAGTCCTCCGGTCAGCTCCGAACCCTTCCTGCTTGGAAGCAAGAGGTTAGGGATGAGGAAGGGCGGAGAAGATTCCATGGAGCATTTACAGGAGGTTTCTCAGCTGGTTACTATAATACAGTGGGCTCAAAGGAAGGGTGGGCTCCTCAATCTTTCAAATCTTCCAGGAAGAACAGAGCTGAATTCAAAGAGCAGAACATACTGAATTTCCTAGATGAAGATGAGAAAGCTGAATTGGAAGGTCGGTTTCTGGGGACATCTTCTCAGTTTGACACATTTGGTTTCACAGCTACTGAAATTGCTCGCAAACAAGCTGAGAAGGAACAGAAGCAAAGGCCATCCATTATTCCTGGACCTGTTCCTGATGAAATGGTTCAACCAGCTGCAGAGTCTGTTGGGGTAAAACTACTCTTGAAGATGGGATGGAGGCGTGGTCGAACTATTAAGGACTCACATGCTGATGCACTCTATGATGCCCGAAGACAGGCACGGAGAGCTTTCTTAGCATTCTCTTCAGATGATCCAAAAGAGAAAACTACTGAGTCTGAGCCAATTAAGGGTGGCATTGAAAATTTTCTTGAGCAATCTGTGAATGATGATGTTCAGTCTTCTAAGAGCACACCAGTTTATGTACTCAACCCAAAGCAAGACCTGTATGGTTTAGGTTTTGATCCTTATAAGCATGCTCCTGAGTTTAGAGCGAAAAAAAGATCACGTGTATCAAGCAAAGGGGGTCCTGAGTATAGCAAAAACTTGTCCACAAGGGATGGTCTTTTTGGTTTAAAGTCAGGAAAGGCTGCCCCTGGTTTTGGCATTGGAGCACTTGAGGAACTTGATGCTGAGGACGAGGATGTCTATTCCACCGGTTATGAGTTCGAGGATACTTATGTTCAAGAAGATGAAGAACCTTCAAATTTGAGCTTGGACAAGCTGAAGAAGAAGAAGGATCAGAAGAACCAGGATAGTCTGCCCGGCTTTAGAGTTGCATCCAATCCTGACTATCAAATGGAAAGATTTGAGGCTCCTCCTATTCCCAAGGATTTTGTGCCCCGGCATGCATTTTCTGGGCCTCTTGAGATAAACCGCAAGAACTATGATGTCCCTCCACCAGATGTTCCTTCTCCTGAGGACAGCAATTTGAAAATATTGATTGAGGGAGTTGCAAATCTGGTTGCTAGATGCGGTAAATTGTATGAGGACCTATCTAGAGAAAAGAATCAATCAAATCCACTGTTTAGTTTCCTTTCTGGTGGTACTGGCCATGATTATTATGCAAGGAAACTGTGGGAGGCACAACAGAAATACAATGACCAAACTAAGCGGCTTTTGGATGGAAAAGTGCCTTCTGATGTGCGAAGGCTAACAGCTGAGAGCCGAGGCCAGCTCTTGGGGGAAAAACCACTAGAAAGAAGCTCCCAAGATCCATCCCCTTCTGTTGCTTCTACTGACATTCATCTCCAATACAATCTTACAGATACATTTATGAATTCTGCATCATTTAGTGAGTTACCAGATGCTGAAAAACCTTTCAAAGATGATCCCGCAAAGCAAGAAAGATTTGAGCAGTTTCTCAAGGAAAAGTATAAAGGGGGCTTACGATCTACAAGTTCAAGCTTGGCTAGTGACATGTCAGAAGCTGCTCGTGCTCGAGAGAGACTAGATTTTGAGGCTACAGCTGAGGCAATAGAAAAAGGAAAGCAGGGAAAGGGAAACAAGCTTACCATTCCATCTTCCATGGACTTCATCACGGGTGGTCTTCAGTTTACTTCTGGTGCAGTGGAGCCAAAGAAAGATCTGCAAACTGAAGATTTCATTGGGAAAAAGATGTACCCGAAGAGGGAAGAGTTTCAATGGCGACCTTCACCACTTCTCTGCAAACGATTCGATCTCATTGATCCTTATATGGGGAAGCCGGCCCCTGCTCCGCGGATTAGGAGCAAGATGGATTCATTGATCTTTACATCAGATTCAGTCAAAGGTACCAAAGTAGAAGAGCCTGTCACTGCAAAGAACAACATATCACCTGTGCAACGATATGCTACTCAAGAGATTACTAAAGGTACTGCTGAAAATGAAACTGAAGGAGATGTGGAAGTGGAAAATATTGAAAGGCCAGTTGACCTATACAAGGCTATTTTCTCTGATGATTCAGATGATGAAGGAGAAGAGCCTAATTTTAAAAAAGTGGAGAATCAAGAAAAGAAAGCTGAAGTAGCCAGTACAGCATTGAGCCGATTGATTGCTGGTGACTTTCTGGAATCATTGGGTAAAGAACTAGGGCTTGAGGTTCCTCCTGATATGCCTTACCCGACACAAAAATCCAGGAATGCTGCTACTGAGGAAGAAATTGCCAATGAATATGCAAGAACTGACATCCAAAAGGGTGAAAACAACAATAAGACTTCATTAAATCAAGGTTTGCAATTTGATCAGGACATTGCTCATGAGGTTGAACCCTCAAAAGGTGATGCCATTCATGCAAATATGCTCAAGGGTGGTAGTATCAAGAACAAGGAAACTAGCTTCTATGACAGTAAACATAGTAAGCCTAATGGGGAGAGTTCTAAAGATGACATGAAAATTAAATCACCTTCAACCCGCCACCAATATCACAGCAGCAGTTCTTCATCAGAAGATGCAAGGGACAGAAAGCACTCTGCTAAGTTTAATAGGGAAAAACATGAAGAGCACAGGAAATTTAAAACACCTTTAACAAACTGCCGAGATTATAGCGGCAGTTCTTCATCAGAAGAGGAAAGGAGCAGAAAACGCTCCAGGCATCATCGACATAAGAGGCATGATGCCGGAAGCGATTCATCCAGTGACAATGAAATTGATCGTCACAGTTCAAGGTCAAAAGAGAGAAAGAAAGGATCTTCCCGAGAAAAGAGCAGTGGAAGTAGAAAACACTCAAAACGTCACAAGCACAGAAGGCATGATTCCCCAAGTCGATCATCTCATTATAGCATGGAGAAGGACAGTGCACATTCCAAAAAGGAGAAAAAGCGGAGGGAATGA 3108 0.4337 MDSDEEDFVFYGTPIEREEELSSRKKKAIAESSGQLRTLPAWKQEVRDEEGRRRFHGAFTGGFSAGYYNTVGSKEGWAPQSFKSSRKNRAEFKEQNILNFLDEDEKAELEGRFLGTSSQFDTFGFTATEIARKQAEKEQKQRPSIIPGPVPDEMVQPAAESVGVKLLLKMGWRRGRTIKDSHADALYDARRQARRAFLAFSSDDPKEKTTESEPIKGGIENFLEQSVNDDVQSSKSTPVYVLNPKQDLYGLGFDPYKHAPEFRAKKRSRVSSKGGPEYSKNLSTRDGLFGLKSGKAAPGFGIGALEELDAEDEDVYSTGYEFEDTYVQEDEEPSNLSLDKLKKKKDQKNQDSLPGFRVASNPDYQMERFEAPPIPKDFVPRHAFSGPLEINRKNYDVPPPDVPSPEDSNLKILIEGVANLVARCGKLYEDLSREKNQSNPLFSFLSGGTGHDYYARKLWEAQQKYNDQTKRLLDGKVPSDVRRLTAESRGQLLGEKPLERSSQDPSPSVASTDIHLQYNLTDTFMNSASFSELPDAEKPFKDDPAKQERFEQFLKEKYKGGLRSTSSSLASDMSEAARARERLDFEATAEAIEKGKQGKGNKLTIPSSMDFITGGLQFTSGAVEPKKDLQTEDFIGKKMYPKREEFQWRPSPLLCKRFDLIDPYMGKPAPAPRIRSKMDSLIFTSDSVKGTKVEEPVTAKNNISPVQRYATQEITKGTAENETEGDVEVENIERPVDLYKAIFSDDSDDEGEEPNFKKVENQEKKAEVASTALSRLIAGDFLESLGKELGLEVPPDMPYPTQKSRNAATEEEIANEYARTDIQKGENNNKTSLNQGLQFDQDIAHEVEPSKGDAIHANMLKGGSIKNKETSFYDSKHSKPNGESSKDDMKIKSPSTRHQYHSSSSSSEDARDRKHSAKFNREKHEEHRKFKTPLTNCRDYSGSSSSEEERSRKRSRHHRHKRHDAGSDSSSDNEIDRHSSRSKERKKGSSREKSSGSRKHSKRHKHRRHDSPSRSSHYSMEKDSAHSKKEKKRRE* 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1852 1035 PANTHER G PATCH DOMAIN-CONTAINING PROTEIN 1 937 1034 - -
Dod05g1852 1035 PANTHER G PATCH DOMAIN-CONTAINING PROTEIN 1 1 930 - -
Dod05g1852 1035 PANTHER BNACNNG56020D PROTEIN 1 930 - -
Dod05g1852 1035 PANTHER BNACNNG56020D PROTEIN 937 1034 - -
Dod05g1852 1035 Pfam Surp module 413 460 IPR000061 GO:0003723|GO:0006396
Dod05g1852 1035 Pfam Protein of unknown function (DUF1604) 39 117 IPR011666 GO:0006397
Dod05g1852 1035 MobiDBLite consensus disorder prediction 263 285 - -
Dod05g1852 1035 MobiDBLite consensus disorder prediction 326 359 - -
Dod05g1852 1035 MobiDBLite consensus disorder prediction 870 895 - -
Dod05g1852 1035 SUPERFAMILY Surp module (SWAP domain) 392 464 IPR035967 GO:0003723|GO:0006396
Dod05g1852 1035 MobiDBLite consensus disorder prediction 333 351 - -
Dod05g1852 1035 Gene3D Surp module 343 468 IPR035967 GO:0003723|GO:0006396
Dod05g1852 1035 SMART surpneu2 411 463 IPR000061 GO:0003723|GO:0006396
Dod05g1852 1035 MobiDBLite consensus disorder prediction 135 154 - -
Dod05g1852 1035 MobiDBLite consensus disorder prediction 821 839 - -
Dod05g1852 1035 MobiDBLite consensus disorder prediction 1013 1028 - -
Dod05g1852 1035 MobiDBLite consensus disorder prediction 487 510 - -
Dod05g1852 1035 MobiDBLite consensus disorder prediction 816 1035 - -
Dod05g1852 1035 MobiDBLite consensus disorder prediction 996 1012 - -
Dod05g1852 1035 MobiDBLite consensus disorder prediction 904 934 - -
Dod05g1852 1035 MobiDBLite consensus disorder prediction 964 995 - -
Dod05g1852 1035 ProSiteProfiles SURP motif repeat profile. 413 457 IPR000061 GO:0003723|GO:0006396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1852 K13123 - gmx:100796934 1410.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1852 05 44064123 44078996 Dod05g1852 05 44064123 44078996 ECH