Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1831 ATGTGGGAGAAGGCGCTTCTACGCACGTGCACTTACAGTTACAGACACACGCGGAACACACACTCTTCCGTTCACCGCTTCCGCTGCTTCACGTTACTATCACCATCCCCAACTGCAACTGCAACTAGGACACCTATTCCGCTTCAATTCCATGTTTCTTTTTTCTCTCATCTCCAACCTCCAACTCAACCTCTCACATCCTTCCCTTTCCAAGTCCGTTTCCATTCTTCTTCATCTTCAAGCCAACAACAACAACAACAACATAAACAAGACGACGCCGTAGCAGGTGATGAATACCCTAGTGGAGACTTCGAGTTCGAGCCAATTACTGGATGGAGGAAACACATCGTCAAGCTCAAGATGCTACTTGCTTTGCCTTGGGAGCGTGTCCAACACGGCTCCGTCTTGTCCATCAAGTTGCGCGGCCGGATATCGGATCAGCTGCAGAGTAGGTACTCTCGAGCATTATCTCTGCCTCAAATTTGTGACAATTTCGTAAAAGCAGCCTATGATCCCCGAATCTCCGGCATCTATCTCCAAATCGACTACTTGAGTTGCGGCTGGGCTAAACTCGATGAAATTCGAAGGCATATACTCAATTTCAGAAAATCAGGGAAATTTGTTGTGGCTTATGTCCCTTTATGTCGAGAAAAAGAATACTACCTTGCATCTGCATGTGAAGAGATATATGCCCCTCCAAGTGCCTATTTTTCTTTGTTTGGATTGGCCTTTCAAGCCCCGTTCCTCAGGGGTGTTTTAGATAACCTAGGAATTGAACCACAGATGGTAAGGATTGGCAAATACAAAGCAGGAGATCTACTAACCCATAGAACAATGTCTGAAGAGAATTCTGAGATGCTGAATGCATTGCTTGATAATATCTATACAAATTGGCTGGATAAAGTTTCTTCTGCTAAAGGAAAGAAAAGAGAAGATGTTGAAAACTTCATAAATAAAGGTGTGTATCAAGTAGACAGGCTGAAGAAAGAGGGCTTCATATCGAACATAATCTATGAGGACGAGGTGATTGCCAAGTTAAAGGAGAGACTAGGAGTGAAAACAGATAAAAATCTGCCTATGGTTGATTACAGGAAATACTCTAGAGTAAGGAAATGGACTCTTGGAATATCAGGTAGTAGAGAGTTGATAGCCATCATCAGAGCCTCAGGGACCATTCTTCATGTTGAGAGTCCATTTAGTGTTCCTACCTCAAGCATTATTGCAGAGAAGTTCATTGAGAAGATTCGCAAAGTCAAAGAATCAAAAAAATATAAGGCTGTGATTATCCGAATTGATAGTCCGGGAGGTGATGCTCTTGCTTCTGATTTGGTATGGAGAGAAGTCAGGCTTCTGGCTGCCTCAAAACCAGTCATTGCTTCAATGTCTGATGTTGCAGCAAGTGGAGGGTACTATGTGGCAATGGGAGCAGGGGCTATTGTTGCAGAAAGTCTTACCTTAACTGGTTCAATTGGAGTGGTTCTAGCAAAATTTAACCTGGGGAAACTCTATGAGAAGATTGGCTTCAATAAAGAAATCATATCAAGGGGAAGATATGCTGAGCTCCTTGCAGCTGACCAGCGTTCTTTTCGGTACTACGCGATCACCTGA 1608 0.4353 MWEKALLRTCTYSYRHTRNTHSSVHRFRCFTLLSPSPTATATRTPIPLQFHVSFFSHLQPPTQPLTSFPFQVRFHSSSSSSQQQQQQHKQDDAVAGDEYPSGDFEFEPITGWRKHIVKLKMLLALPWERVQHGSVLSIKLRGRISDQLQSRYSRALSLPQICDNFVKAAYDPRISGIYLQIDYLSCGWAKLDEIRRHILNFRKSGKFVVAYVPLCREKEYYLASACEEIYAPPSAYFSLFGLAFQAPFLRGVLDNLGIEPQMVRIGKYKAGDLLTHRTMSEENSEMLNALLDNIYTNWLDKVSSAKGKKREDVENFINKGVYQVDRLKKEGFISNIIYEDEVIAKLKERLGVKTDKNLPMVDYRKYSRVRKWTLGISGSRELIAIIRASGTILHVESPFSVPTSSIIAEKFIEKIRKVKESKKYKAVIIRIDSPGGDALASDLVWREVRLLAASKPVIASMSDVAASGGYYVAMGAGAIVAESLTLTGSIGVVLAKFNLGKLYEKIGFNKEIISRGRYAELLAADQRSFRYYAIT* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1831 535 Gene3D - 133 267 - -
Dod05g1831 535 Gene3D - 275 368 - -
Dod05g1831 535 SUPERFAMILY ClpP/crotonase 383 498 IPR029045 -
Dod05g1831 535 SUPERFAMILY ClpP/crotonase 130 341 IPR029045 -
Dod05g1831 535 CDD S49_SppA_67K_type 136 348 - -
Dod05g1831 535 PANTHER PROTEASE 4 72 530 - -
Dod05g1831 535 Gene3D - 378 532 - -
Dod05g1831 535 Pfam Peptidase family S49 451 523 IPR002142 GO:0006508|GO:0008233
Dod05g1831 535 Pfam Peptidase family S49 201 352 IPR002142 GO:0006508|GO:0008233
Dod05g1831 535 CDD S49_Sppa_N_C 383 525 IPR002142 GO:0006508|GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1831 Dod-Chr5 43850255 43861073 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1831 K04773 - gmx:100781522 709.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1831 05 43850255 43861073 Dod05g1831 05 43850255 43861073 ECH
Dod05g1831 05 43850255 43861073 Dod09g0519 09 8019279 8020426 PCT