Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1824 ATGGAGCTGTGGAACAAAGCTCGAAGCTTGGCGGAAGAAACAGCGAAGCGATCGCAGGACCTGACCCTGAGAGCTTCCAAGCTCTCCAACATGATATCGGAGACCTCGAAGGAAATCGCGGCTCAAGCTTCGAAGCGAGCTGACCAGCTCAGAGCCGAAGCCATCAAGCGAGCCGATCAGATCAAGCACCTCGCCGAAGGCGCCACCGCCAGCCCAAGCCCAATCACGGCCCAATCACAGCCCAGCGATCTCGACCTCGAAACTTTCGGCATCACCGACGAGTTGAGAGAATTCGTTACAGGGATAACCCCCACCACCTTCCGAGATTTCCCTCTTCAAGATGATACGGAAGTGTTTGATGTTCCTGCTGTTTCCAATGTTAGGCAGGATCTAACCGAGTGGCAGGAAAAGCATGCCAGTCTTGTTCTTTCTACTGTTAAGGAAATTTCAAGACTGAGGTATGAGCTGTGTCCACGTCTCATGAAAGAGAGGAAGTTTTGGAGAATATATTTTATACTTGTGAATAGTCACGTTGCACCCTATGAGAATCGGTACATGGAAGATGCTAAACTAAAATCATCTGAGCAAGTAAAAGATTACAAGGAGATGGAACCATTAGAAGTTGGATTGACTGCTAATCAAGAGATGCAGGAAGCTAAAATGAAATCATCTGAACAAGTAAAAGATCACAACGTGATGGAACCATTAGAAGTTGGATTGACCTCTAATCAAGAGGTGCAGGAAGGGAAAAAAGAGACCAAAACTTCAACTTCGACAAATGAACAAGACTTGGATCTATTTCTTCTGGGAGACACAGGAGACAGTGACAATGACCAAGATGATGGCAATGGGGACTTGGATGATGATTTGGACAACCTGGTGGATAGTTCGGATGATGAAGCGGGGAAATCATAA 915 0.4656 MELWNKARSLAEETAKRSQDLTLRASKLSNMISETSKEIAAQASKRADQLRAEAIKRADQIKHLAEGATASPSPITAQSQPSDLDLETFGITDELREFVTGITPTTFRDFPLQDDTEVFDVPAVSNVRQDLTEWQEKHASLVLSTVKEISRLRYELCPRLMKERKFWRIYFILVNSHVAPYENRYMEDAKLKSSEQVKDYKEMEPLEVGLTANQEMQEAKMKSSEQVKDHNVMEPLEVGLTSNQEVQEGKKETKTSTSTNEQDLDLFLLGDTGDSDNDQDDGNGDLDDDLDNLVDSSDDEAGKS* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1824 304 Gene3D BSD domain 102 189 IPR035925 -
Dod05g1824 304 SUPERFAMILY BSD domain-like 90 183 IPR035925 -
Dod05g1824 304 PANTHER BSD DOMAIN PROTEIN 214 300 - -
Dod05g1824 304 PANTHER BSD DOMAIN PROTEIN 1 219 - -
Dod05g1824 304 MobiDBLite consensus disorder prediction 238 304 - -
Dod05g1824 304 ProSiteProfiles BSD domain profile. 126 178 IPR005607 -
Dod05g1824 304 SMART wurzfinal6 126 178 IPR005607 -
Dod05g1824 304 Pfam BSD domain 133 177 IPR005607 -
Dod05g1824 304 PANTHER BSD DOMAIN-CONTAINING PROTEIN 214 300 - -
Dod05g1824 304 PANTHER BSD DOMAIN-CONTAINING PROTEIN 1 219 - -
Dod05g1824 304 MobiDBLite consensus disorder prediction 274 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1824 Dod-Chr5 43762533 43768185 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1824 3 276 EF-hand Containing Proteins AT1G69030 39.809 1.61e-67 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1824 - - ahf:112722625 326.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1824 05 43762533 43768185 Dod05g1824 05 43762533 43768185 ECH