Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1800 ATGGCTAACACACCAGGCTTTGCACCCTTTGTATTTCTATTGCTCATTATTGGATGCTCTGCAAGGCCTTTGTTTCCCAATCCTAGCAAAGGTGATGATAAAAATCGGCAGCCTCTGCAAACTTTTCGCCCATATAACATAGCACATCGGGGTTCAAACGGAGAGCTTCCTGAAGAAACTCGTCCTGCATATTTGAGAGCTATTGAAGAAGGTGCAGACTTCATTGAAACTGATATCTTATCTTCCAAAGATGGTGTTCTTATATGTTTCCATGATGTTACCCTTGATGATACTACTGACATTGCAAAACACAAAGAATTTGCAAATCGTAAAAGGACTTATGAGGTCCAAGGGTCCAATGTCACTGGATTTTTTACTGTTGATTTCACATTAAAGGAATTAAAGTCATTGAGGGTACATCAGAGGTATAGCTTCAGAGATCAACAGTATAATGGAAAATTTCAAATCATCACTTTCGAAGAGTTCATTTCCATTGCACTGGATGCTCCCAGAGTTGTTGGAATATATCCAGAGATAAAGAATCCAGTATTTATCAATCAGCATGTGAAATGGTCAAATGGCAAAAGATTTGAAGACAAGTTTGTGGACACACTTCAGAAATATGGATACAAGGGTCAATACTTGTCAAAACAATGGTTGAAACAACCTGCATTTATTCAATCATTTGCTCCAACTTCACTTGTGTATATATCAAATCAAACAGACTTGCCCAAGATTTTCTTAATTGATGACATTACTATTCCAACACAAGACACTGATCAGTCATATTGGGAAATTACTTCTGATAGTTACCTAAACTACATAAAGAAGTATGTTGTGGGAATTGGACCTTGGAAGGACACGTTGGTTCCTGTGGCAAATAATTATTTGCGAACCCCTACTGATCTTGTTTCCAGGGCACATGCCCATGACCTTCAGGTGCATCCATACACTTACCGAAATGAGAACCAGTTTTTGCACTTCAACTTTAGTCAAGATCCATATGCAGAGTATAATTACTGGATCAACAAGATAGGAGTTGATGGTCTGTTTACAGACTTCACAGGTAGTCTTCATAATTTTCAGGAATGGACCTCCAGTGACGACAAGGCTGCATCAAAGCTATTGCATAAAATTGCTTTGTTAGTCTCCTCTTACGAAAGAGCATGA 1170 0.3846 MANTPGFAPFVFLLLIIGCSARPLFPNPSKGDDKNRQPLQTFRPYNIAHRGSNGELPEETRPAYLRAIEEGADFIETDILSSKDGVLICFHDVTLDDTTDIAKHKEFANRKRTYEVQGSNVTGFFTVDFTLKELKSLRVHQRYSFRDQQYNGKFQIITFEEFISIALDAPRVVGIYPEIKNPVFINQHVKWSNGKRFEDKFVDTLQKYGYKGQYLSKQWLKQPAFIQSFAPTSLVYISNQTDLPKIFLIDDITIPTQDTDQSYWEITSDSYLNYIKKYVVGIGPWKDTLVPVANNYLRTPTDLVSRAHAHDLQVHPYTYRNENQFLHFNFSQDPYAEYNYWINKIGVDGLFTDFTGSLHNFQEWTSSDDKAASKLLHKIALLVSSYERA* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1800 389 ProSiteProfiles GP-PDE domain profile. 44 362 IPR030395 GO:0006629|GO:0008081
Dod05g1800 389 SUPERFAMILY PLC-like phosphodiesterases 44 360 IPR017946 GO:0006629|GO:0008081
Dod05g1800 389 PANTHER OS01G0763600 PROTEIN 8 387 - -
Dod05g1800 389 CDD GDPD_ScGlpQ1_like 44 355 - -
Dod05g1800 389 Pfam Glycerophosphoryl diester phosphodiesterase family 49 356 IPR030395 GO:0006629|GO:0008081
Dod05g1800 389 Gene3D Phosphatidylinositol (PI) phosphodiesterase 42 361 IPR017946 GO:0006629|GO:0008081
Dod05g1800 389 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 8 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1800 Dod-Chr5 43414949 43419937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1800 9 389 Acyl Lipid Metabolism Gene Families AT1G74210 73.247 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1800 K01126 - gmx:100778145 690.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1800 05 43414949 43419937 Dod05g1800 05 43414949 43419937 ECH