Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1796 ATGGCAGAACCCCAGAGAGAGACACAACCACCTTCCTCAACATCAACGCTCCTCGACTCCCTCGGCGAAGAAATCGTGAGAATCGTGGCCCCAGTCTCAATCTGCATGTTCCTCGTCGTCATCCTCGTCTCCATCCTCAACAGCCCCACCGACCCTTCCCTCTCTCTCTCCTCCATCGCCACCATCGCCTACACCGAGTCCACCTCGGATTCCTCTTGGGACAAGTTCCTCGGCGCCCTCCTCAACTCCCTCGCCTTCGTCCTCCTCGTTACCTTCGCCACCTTCCTCTTGGTCCTCCTCTTCTACTTCAGGTGCACCAACTTCCTCAGAATCTACATGGCCTTCTCCGCTTTCATCGTCTTGGCCTTCCTCGGAGGTGAAATCTCCTTGTTCTTGATCCAGCATTTTGCTACCCCTGTTGATTGTGTCACTTTTTTACTCGCCTTGTGTAATTTCTCTGTTGTTGGTGTTCTGGCTGTTTTTATGTCCAAAATGCCGATACTTGTGACTCAAGGGTACTTGGTTGTTATTGGGATATTGGTTGCTTATTGGTTTACCATGTTGCCTGAGTGGACCACTTGGGCCATGCTTGTTGCCATGGCTTTGTATGACCTTGCTGCTGTTCTTTTGCCTGTTGGCCCGTTGAGGCTTCTTGTTGAGCTTGCAATTTCGAGGGATGAAGAGATCCCGGCATTGGTTTATGAGGCTAGGCCCGTGAATGTTGAGAATTTGGATCCATCAAGGCGTGCTGTTGCTCAGAGGAGGTTGTGGAGAGATAGAAGGGTTGTTGAGGGTTCCAATCTCTTGAGTGATGATGGTGGTAATCTTAATGTTGGCTCTGTGTTGGGTCATGGCACTGGTGGTGAATTGAATGCCGGTCCGGATGCAAATGCAGTTTCTGGTTCGAATTCAGGCAGAAATGCCCCGGAGGGTGTGCATGATGACACTAATTTGGCTGGGGAGGATGGTGTTTCGGATTCGAATTTGAGGTCTAGTACTTCTCCTGGGATCTATAGTGATAGAAACTTGGTCAGAGCAGAAGAGGGGCGGGTTCGAGAAACTGATTCGGAGGTTACTCCCTTGATTGGTCATGGAATGAATGTGCAGATCCGTAGAGTGGAGGATTCCGCATCGAATGAGAATTTGATGCTGGAGGGAATTGGATTGGGTTCGTCTGGCGCAATCAAGTTAGGGCTGGGAGATTTTATCTTCTACAGTGTTTTGGTTGGCAGGGCAGCGATGTATGATTTTATGACGGTGTATGCATGTTATCTTGCCATCATTGCTGGTCTGGGTGTAACTTTGATGCTTTTGGCTTTATATCAGAAAGCTTTGCCTGCTCTTCCTGTGTCGATAGCACTGGGTGTGTTGTTTTATTTCCTGACCCGGCTATTGCTTGAAGTATTTGTAGTACAATGTTCCATAAATCTCCTGATGTTTTAA 1443 0.4872 MAEPQRETQPPSSTSTLLDSLGEEIVRIVAPVSICMFLVVILVSILNSPTDPSLSLSSIATIAYTESTSDSSWDKFLGALLNSLAFVLLVTFATFLLVLLFYFRCTNFLRIYMAFSAFIVLAFLGGEISLFLIQHFATPVDCVTFLLALCNFSVVGVLAVFMSKMPILVTQGYLVVIGILVAYWFTMLPEWTTWAMLVAMALYDLAAVLLPVGPLRLLVELAISRDEEIPALVYEARPVNVENLDPSRRAVAQRRLWRDRRVVEGSNLLSDDGGNLNVGSVLGHGTGGELNAGPDANAVSGSNSGRNAPEGVHDDTNLAGEDGVSDSNLRSSTSPGIYSDRNLVRAEEGRVRETDSEVTPLIGHGMNVQIRRVEDSASNENLMLEGIGLGSSGAIKLGLGDFIFYSVLVGRAAMYDFMTVYACYLAIIAGLGVTLMLLALYQKALPALPVSIALGVLFYFLTRLLLEVFVVQCSINLLMF* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1796 480 MobiDBLite consensus disorder prediction 296 310 - -
Dod05g1796 480 Pfam Presenilin 22 470 IPR001108 GO:0004190|GO:0016021|GO:0016485
Dod05g1796 480 PANTHER PRESENILIN 15 480 IPR001108 GO:0004190|GO:0016021|GO:0016485
Dod05g1796 480 Gene3D Presenilin 376 472 IPR042524 -
Dod05g1796 480 MobiDBLite consensus disorder prediction 321 336 - -
Dod05g1796 480 MobiDBLite consensus disorder prediction 280 336 - -
Dod05g1796 480 PRINTS Presenilin family signature 29 39 IPR001108 GO:0004190|GO:0016021|GO:0016485
Dod05g1796 480 PRINTS Presenilin family signature 204 221 IPR001108 GO:0004190|GO:0016021|GO:0016485
Dod05g1796 480 PRINTS Presenilin family signature 187 194 IPR001108 GO:0004190|GO:0016021|GO:0016485
Dod05g1796 480 PANTHER PRESENILIN 15 480 - -
Dod05g1796 480 SMART psh_8 77 466 IPR006639 GO:0004190|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1796 Dod-Chr5 43382136 43384334 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1796 6 480 Miscellaneous Gene Families AT2G29900 55.556 2.64e-138 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1796 K04505 - gmx:100799643 607.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1796 05 43382136 43384334 Dod05g1796 05 43382136 43384334 ECH