Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1790 ATGGAGTCTGAGAAGAGTGAGAGCGGCACCAAAATCGCCGGTGAACGGCGCGTGGGTTTACTATTCGACGAGAGGATGTGTAAGCACGAAAACACGCGCGACGATTACCACCCCGAGACCCCTAACCGGATTAGGGCTATTTGGGACAAGCTCCAAACCACTGGCATTGCCAATCGATGTGTGATTTTGGATGCCAAAGAAGCTGAAGACAAACATATATTATCAGTACATTCCAAAAATCATGTAAACCTGATTAAGAATATCAGCTCAAATTCACGGAGGCTTAAGATTGCGTCAAGATTGAATTCTATATATTTTAATGAAGGTTCATCTGAAGCTGCTTATCTTGCTGCTGGCTCTGCTGTTGAGGTTGTTGAAAGAGTGGCAAGCAGGGACTTGCATTCTGCTGTTGCCATTGTTAGGCCTCCAGGTCATCATGCAGAACACAATGAAGCCATGGGATTTTGTCTATTCAACAATGTGGCAATTGCTGCAAATTATCTCTTAGATGAAAGACCAGACTTGGGCGTAACGAAGATTTTAATTGTTGATTGGGACGTCCATCATGGAAATGGTACTCAAAAAATGTTCTGGAATGATTCTCGAGTTTTATTCTTCTCTGTTCACAGGCATGAATTTGGGAGTTTCTATCCAGCTAGTGATGATGGCTTTTATACCATGATTGGAGAAGGAGCAGGTGCTGGATATACTATAAATGTACCTTGGGAGAATGGGAGATGTGGTGATGCAGACTACTTTGCAGTGTGGGACCACATTCTGCTACCTGTTGCCAAAGAATTTAATCCAGACGTAGTTATTGTTTCTGCTGGATTTGATGCAGCTATTGGCGATCCTCTTGGGGGATGTCGTGTTACACCATTTGGTTATTCTGTGATGCTGAAAAAGTTGATGAATTTCGCTGAAGGTAGGATTGCTCTGGTTTTAGAAGGAGGATATAATCTTGACTCCATTGCTAAGTCTATGCATGCTTGCGTGGAAGTTTTACTAGAAGACAAGCCTATCATTGGATCATCAGAGGCCTATCCATTTGAATCGACCTGGCGTGTGATTCAAGCAGTTCGCCAGGAGTTAAGTCCTTTCTGGCCTACACTTGCTAGTGAATTACCACAAAAGTTAGTTTCTCTAATGGCACCTCCTCCGCATACTCTTATCTCAAGCTCTGACTCTGAGACAGAGGATGACAAGGGTAGACCGAACTTGGAACCTCCAGAGCTTCTGCAAGATGTTATAAAACCACTTTCTGAGTTGACAGTTAATGCAGATCAAGAGACTAAAACGTCCACTTGGCGATCAGAATTGTCAAATAATTATATGTGGTATGCCTCATATGGATCAAATATGTGGAATTCAAGATTCTTGTGCTATATAGAAGGTGGACAGGTGGAAGGTATGAAAAAGCACTGTTCTGGTTCAGTGAACAAAGCTCCGCCAAAGGCGATCCTGTGGAAGACTTTTCCTTGCCATATATTTTTTGGTCGTGATTATTCGCATTCATGGGGTACCGGAGGGGTTGCGTTTCTTAATCCTGAGAAGGCCTTTGAGCACAAGACCTACATGTGTCTGTACAAAATTTCGCTGGAGCAATTCAATGATATTTTACTTCAGGAAAATGGTTTAAGCCTTGATGTGGGTTCTCCTTTGTTTGATTTAACGACCCTGAATTCTATCTCTGAGAAGGAATTCAATTCTCAGGAGGTTTTCAAGGATACTTGGTATCGCAATGTTGTCTACTTGGGAAAGGAGCAGGATACTCCAATTATTTCCATGACGTGTTCGATTTCTGATATTGAATGCTTCAAATCTGGGAAGCTGCCTGTACGAGCTCCTAGTGAAGCATACGTCAACACCTTAATTAGAGGACTGGTAGAGGGCAAACAACTTTCAGAGGTGGAAGCCATTGCTTACATAGAAGCTGCTGCTAAATCGTTAATTTGCAGCATAGGCATTTCATTTGCCTTTCGATGTAAATCTTCTAGATCAACAACTTACCAGTAG 2016 0.4246 MESEKSESGTKIAGERRVGLLFDERMCKHENTRDDYHPETPNRIRAIWDKLQTTGIANRCVILDAKEAEDKHILSVHSKNHVNLIKNISSNSRRLKIASRLNSIYFNEGSSEAAYLAAGSAVEVVERVASRDLHSAVAIVRPPGHHAEHNEAMGFCLFNNVAIAANYLLDERPDLGVTKILIVDWDVHHGNGTQKMFWNDSRVLFFSVHRHEFGSFYPASDDGFYTMIGEGAGAGYTINVPWENGRCGDADYFAVWDHILLPVAKEFNPDVVIVSAGFDAAIGDPLGGCRVTPFGYSVMLKKLMNFAEGRIALVLEGGYNLDSIAKSMHACVEVLLEDKPIIGSSEAYPFESTWRVIQAVRQELSPFWPTLASELPQKLVSLMAPPPHTLISSSDSETEDDKGRPNLEPPELLQDVIKPLSELTVNADQETKTSTWRSELSNNYMWYASYGSNMWNSRFLCYIEGGQVEGMKKHCSGSVNKAPPKAILWKTFPCHIFFGRDYSHSWGTGGVAFLNPEKAFEHKTYMCLYKISLEQFNDILLQENGLSLDVGSPLFDLTTLNSISEKEFNSQEVFKDTWYRNVVYLGKEQDTPIISMTCSISDIECFKSGKLPVRAPSEAYVNTLIRGLVEGKQLSEVEAIAYIEAAAKSLICSIGISFAFRCKSSRSTTYQ* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1790 671 SUPERFAMILY Arginase/deacetylase 16 369 IPR023696 -
Dod05g1790 671 PANTHER HISTONE DEACETYLASE 4 605 - -
Dod05g1790 671 Gene3D - 433 650 - -
Dod05g1790 671 PANTHER BNAA09G05590D PROTEIN 4 605 - -
Dod05g1790 671 PRINTS Histone deacetylase superfamily signature 269 279 IPR000286 -
Dod05g1790 671 PRINTS Histone deacetylase superfamily signature 142 165 IPR000286 -
Dod05g1790 671 MobiDBLite consensus disorder prediction 394 408 - -
Dod05g1790 671 Pfam Histone deacetylase domain 37 334 IPR023801 -
Dod05g1790 671 Gene3D Histone deacetylase domain 11 385 IPR037138 -
Dod05g1790 671 MobiDBLite consensus disorder prediction 390 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1790 Dod-Chr5 43309694 43330380 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1790 K11406 - gmx:100788831 1097.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1790 05 43309694 43330380 Dod05g1790 05 43309694 43330380 ECH
Dod05g1790 05 43309694 43330380 Dod09g0405 09 6099458 6102420 PCT