Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1788 ATGATAGGTGGTGCTTGGTGCGTGTGCAAGGATGGAAGCGACGCAGTCCTGCAGAAGACATTGGACTACGCTTGTGGGGCTGGGGCAGACTGTAACCCCCTCCACCAAAACGGGCCTTGTTTCAATCCTAACACAGTCAGGGCACATTGCAACTATGCTGTCAATAGCTTTTTCCAGAAGAAGGGCCAAGCCCAAGGGTCCTGTGAGTTTGCAGGAACAGCCACCATTGTTACATCTGACCCCAGTAAGTACTCCTAA 258 0.5194 MIGGAWCVCKDGSDAVLQKTLDYACGAGADCNPLHQNGPCFNPNTVRAHCNYAVNSFFQKKGQAQGSCEFAGTATIVTSDPSKYS* 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1788 85 PANTHER PLASMODESMATA CALLOSE-BINDING PROTEIN 3 3 83 - -
Dod05g1788 85 PANTHER BETA-1,3 GLUCANASE 3 83 IPR044788 -
Dod05g1788 85 SMART X8_cls 5 84 IPR012946 -
Dod05g1788 85 Pfam X8 domain 6 75 IPR012946 -
Dod05g1788 85 Gene3D - 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1788 Dod-Chr5 43297375 43297632 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1788 3 84 Glycoside Hydrolase AT2G05790 50.000 2.29e-22 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1788 - - gmx:100500078 162.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1788 05 43297375 43297632 Dod05g1788 05 43297375 43297632 ECH