Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1774 ATGGGATTCCACATTGCCTTGGTTCTCTTTCTGGCTTCCCTTCCTTTGACTTTAAGTCAAGATGTTGAACATGGTTCCATTATAGTGGATGGGGCTCAGGCAATAGCTGAGACTGATGATAGCTTTATCTGTGCTACCATTGATTGGTGGCCTCATGATAAGTGTGACTACAACTATTGCCCCTGGGGAAATTCATCTGTTGTAAATTTGGACTTGTCTCATCCTTTCCTTGCCAAGGCTATCCAAGCTTTCAAGCCTTTGAGGATAAGAGTTGGAGGTTCCCTGCAAGACCAAGTGCTGTATGATGTAGGAAGTTTGAAGTCCCCTTGTCATCCATTTCAGAAGATGAAAGGTGGATTGTTTGGATTTTCAAAGGGATGTTTGCACATGACGAGGTGGGATGAGCTGAACCATTTTTTCAATAAGACGGGGGCCACTGTGACATTTGGCTTGAATGCGCTCCGTGGGAGGCACAAGATTAGTCAAACTGCTTGGGGAGGAGACTGGGACCCTACCAATGCTTATGATTTAATAAATTACACCATTTCAAAGGGATACAAAATTGATTCATGGGAATTTGGTAATGAGTTGAGTGGTAAGGGCATTGGTGCAAGTGTTGGTGCAGCACAGTATGGGAAAGACTTGATAAAGCTTAAACAAAATCTACGCACACTATACAAGAAATCGAAGTTCAAACCTTCACTTATAGCACCTGGAGGATTCTATGATAAGGATTGGTTTGATAAGCTTCTTAAGGTCTCAGGTTCAGGTGTAGTCAATGCCATGACTCATCACATATATAATTTGGGCCCAGGTAGTGATGAGCATCTTGACATGAAGATTCTAGATCCTGGGCGCTTGAGCAAGGTAGAATCAATCTTTAGCAATCTGTCAGACACCATTCAGAAGCATGGTCCTTGGGCTTCTGCATGGGTAGGAGAAGCCGGTGGGGCATACAACAGTGGTGGTCGTGATGTTTCTGACACATTTGTGAATAGCTTTTGGTACTTAGATCAACTTGGAATAGCATCCAAATACAACACAAAGGTTTATTGCAGGCAGACTTTAATTGGAGGAAACTATGGCCTCCTCAACACCACCACTTTCACTCCCAATCCTGACTACTACAGTGCACTTTTCTGGAACCAGCTAATGGGGAAGAGTGTTCTTGCAGCTTCCAGTGATGTATTTTCACCTTATTTACGCACTTATGCCCATTGTTCAAAAGGCAGAGACGGGGTAACATTTTTACTGATCAACTTGAGCAACCAGACTCATTTCATGCTAACAATTCATGACCGTGAGCCAGTAAGTACTGGAGAAAATGAAGATGCCAAACACGTCCGTAAAGAAAACACATTCTTTGGCCATCTCAAGAGTGCATTTTCTTGGGTTGGAAGAAAAGGATCAGATGTCACATTCAGGGAGGAGTACCACCTAACTCCAAAAGATGGTTACCTAAGAAGCCAAACCATGATGCTGAATGGTAATCCACTAGACCTAACAAATGATGGAGAAATCCCAACACTGAATCCAGTAAGCAGTAATGTACATTCTCCAATATACATAGCTCCTTTATCCATTGCATTTATTGTATACCCCAACTTTGATGCCCCAGCTTGTGCTGTTGGACGCAGAAAACTTTGA 1647 0.4281 MGFHIALVLFLASLPLTLSQDVEHGSIIVDGAQAIAETDDSFICATIDWWPHDKCDYNYCPWGNSSVVNLDLSHPFLAKAIQAFKPLRIRVGGSLQDQVLYDVGSLKSPCHPFQKMKGGLFGFSKGCLHMTRWDELNHFFNKTGATVTFGLNALRGRHKISQTAWGGDWDPTNAYDLINYTISKGYKIDSWEFGNELSGKGIGASVGAAQYGKDLIKLKQNLRTLYKKSKFKPSLIAPGGFYDKDWFDKLLKVSGSGVVNAMTHHIYNLGPGSDEHLDMKILDPGRLSKVESIFSNLSDTIQKHGPWASAWVGEAGGAYNSGGRDVSDTFVNSFWYLDQLGIASKYNTKVYCRQTLIGGNYGLLNTTTFTPNPDYYSALFWNQLMGKSVLAASSDVFSPYLRTYAHCSKGRDGVTFLLINLSNQTHFMLTIHDREPVSTGENEDAKHVRKENTFFGHLKSAFSWVGRKGSDVTFREEYHLTPKDGYLRSQTMMLNGNPLDLTNDGEIPTLNPVSSNVHSPIYIAPLSIAFIVYPNFDAPACAVGRRKL* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1774 548 SUPERFAMILY (Trans)glycosidases 38 385 IPR017853 -
Dod05g1774 548 Pfam Glycosyl hydrolase family 79, N-terminal domain 25 341 IPR005199 GO:0016020|GO:0016798
Dod05g1774 548 Gene3D Glycosidases 62 383 - -
Dod05g1774 548 PANTHER GLYCOSIDE HYDROLASE FAMILY 79 AMINO-TERMINAL DOMAIN PROTEIN 1 544 - -
Dod05g1774 548 PANTHER HEPARANASE-RELATED 1 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1774 Dod-Chr5 43149309 43155829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1774 1 542 Glycoside Hydrolase AT5G07830 61.384 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1774 K07964 - gmx:100782283 977.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1774 05 43149309 43155829 Dod05g1774 05 43149309 43155829 ECH