Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1748 ATGAGTCGTTCTCCCTCTTCTGCTGCTTCATCTTCGAGTGGCAGAGACGAAAGTAGCAGAAGAAGAAGCAGAAGAAGCCCCACCTCACCGCTCAGGGACCGGTCCAAAACCACTTCTTCCAAGCTCTCTTCTTCTTCTTCTTCTTCTTCTCCTCGTTCATCCCCCACGCGCTCTGCAACTATCCTCCACGACGACGACCTCCTTGTTGCTGACTTCGAAGGCCTACAAATCTCTCAGGACCCTAACCCTAACCCTAGGAGCTTCCCGCACAGCGTGAAGCAGCAATGCTGGGAAAAGGCCGACAAGATCAAAGGACGAGACCCTAACCGCTGGCGCAGGGACGCCCTCGGCAACATCGTCTTTCGCAAGCTCGTCGGTTGCCCTGGCTGTCTCTGCCATGATTACGACCACATTCTCCCTTACTCCAAGGGTGGGAAAAGCACACTGGAAAATTGTCAAGTGTTACAGGCAACAGTTAATCGATCCAAGGGTAATCGAACAGATATATCCAAAGCCGAACTTATTCAGAAGAGTTCTTATTGCAGGGTTTCAGGTCGTGATATGGATCTTTTGGAGCTGTCAGCCTATGGCAATGTCCGGCATGGACCAGATTCTGGGGGTTGTAGAATCCAATGA 636 0.5142 MSRSPSSAASSSSGRDESSRRRSRRSPTSPLRDRSKTTSSKLSSSSSSSSPRSSPTRSATILHDDDLLVADFEGLQISQDPNPNPRSFPHSVKQQCWEKADKIKGRDPNRWRRDALGNIVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTDISKAELIQKSSYCRVSGRDMDLLELSAYGNVRHGPDSGGCRIQ* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1748 211 PANTHER HNH ENDONUCLEASE 18 211 - -
Dod05g1748 211 PANTHER HNH ENDONUCLEASE 18 211 - -
Dod05g1748 211 MobiDBLite consensus disorder prediction 32 60 - -
Dod05g1748 211 CDD HNHc 119 164 IPR003615 -
Dod05g1748 211 MobiDBLite consensus disorder prediction 15 31 - -
Dod05g1748 211 Gene3D - 90 185 - -
Dod05g1748 211 Pfam HNH endonuclease 133 166 IPR002711 GO:0003676|GO:0004519
Dod05g1748 211 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1748 Dod-Chr5 42896231 42899858 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1748 - - gmx:100500174 279.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1748 05 42896231 42899858 Dod05g1748 05 42896231 42899858 ECH