Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1744 ATGAACTCCATGGCCCTCAAATCCTTCGTCGGACTCCGGCAAACCTCGCCGGAAACCCCCCATTTCGCTGTCCAACAAAAGCCCACCACCACCCTCCCCAGGAAGCTCAAGGTCATTGCCGGAAAAACCAGCCCTAAGATCCAGGGCCGCAGCCTCCGCGTCGCCGTCGTGGGCGGAGGCCCCGCCGGTGGCTCCGCTGCAGAGACCTTAGCAAAGGGTGGCATCGAAACGTTCCTGATTGAACGGAAACTCGATAACTGCAAGCCATGCGGCGGAGCCATACCGCTGTGCATGGTTGGAGAGTTCGACCTCCCATTGGACATCATAGACCGCCGCGTCACTAAGATGAAGATGATATCGCCGTCGAACGTGGCGGTGGACATTGGAAGGACCCTTAAGCCCCACGAGTATATTGGCATGGTGAGGCGTGAGGTTTTGGACGCTTATCTTAGGGATAGGGCCAAGGAGAATGGAGCAAACATCATAAACGGGTTGTTCTTGAAGATGGATATTCCCAAGGATAAGGGCTCCCCTTACGTGCTGCATTACTCTGGGTATGATGGGAAAACCGGTGGGATTGGTGAGAAGCGCACTTTGGAGGTTGATGCTGTGATTGGAGCTGATGGGGCTAATTCTAGAGTCGCCAAGGCTATTGATGCTGGTGAATATGACTACGCCATTGCGTTTCAGGAGAGGATAAAAATCCCGGATGATAAAATGATGTACTACGAGAATCTTGCGGAGATGTACGTGGGCGATGATGTTTCTCCGGATTTCTATGGTTGGGTGTTTCCAAAATGTGACCATGTGGCTGTTGGCACTGGCACGGTAACACACAAGGGAGACATCAAGAAGTTCCAACTAGCAACAAGGAAGAGAGCGGAGGACAAGATTTTAGGAGGCAAAATCATCCGCGTTGAGGCACACCCCATACCGGAACACCCCCGGCCGCGAAGATTATCAGGGAGAGTGGCCCTAGTTGGTGATGCTGCCGGCTATGTGACCAAGTGCTCCGGAGAAGGAATCTATTTTGCAGCCAAGAGTGGGAGGATGTGCGCGGAGGCAATAGTTGAAGGGTCAGAGAATGGGAAGAGGATGGTGGAAGAAGGGGACTTGAGGAAGTACTTGGAGAAGTGGGACAAGACTTACTTGGCCAACCTACAAGGTCTTGGATGTGCTTCAGAAGGTGTTCTATAG 1197 0.528 MNSMALKSFVGLRQTSPETPHFAVQQKPTTTLPRKLKVIAGKTSPKIQGRSLRVAVVGGGPAGGSAAETLAKGGIETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKMISPSNVAVDIGRTLKPHEYIGMVRREVLDAYLRDRAKENGANIINGLFLKMDIPKDKGSPYVLHYSGYDGKTGGIGEKRTLEVDAVIGADGANSRVAKAIDAGEYDYAIAFQERIKIPDDKMMYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRKRAEDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVEGSENGKRMVEEGDLRKYLEKWDKTYLANLQGLGCASEGVL* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1744 398 TIGRFAM GG-red-SF: geranylgeranyl reductase family 54 356 IPR011777 GO:0016628
Dod05g1744 398 TIGRFAM ChlP: geranylgeranyl reductase 52 386 IPR011774 GO:0045550
Dod05g1744 398 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 53 75 - -
Dod05g1744 398 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 200 215 - -
Dod05g1744 398 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 321 336 - -
Dod05g1744 398 PANTHER GERANYLGERANYL DIPHOSPHATE REDUCTASE 29 387 - -
Dod05g1744 398 TIGRFAM BchP-ChlP: geranylgeranyl reductase 53 390 IPR010253 GO:0015979|GO:0015995|GO:0045550
Dod05g1744 398 PANTHER OS01G0265000 PROTEIN 29 387 - -
Dod05g1744 398 SUPERFAMILY FAD/NAD(P)-binding domain 52 381 IPR036188 -
Dod05g1744 398 Pfam Pyridine nucleotide-disulphide oxidoreductase 53 222 IPR023753 GO:0016491
Dod05g1744 398 Gene3D - 52 396 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1744 Dod-Chr5 42858398 42860645 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1744 K10960 - gmx:100814603 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1744 05 42858398 42860645 Dod05g1744 05 42858398 42860645 ECH