Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1709 ATGAACAACCACAGCTTGTCGTTCCACTGGAACGAGGACCTCCTCTTCGTGGCCGGGGAGCCTCTAGAAGATTCCATGATCCTCCTCGTGGAAGATCGCACGTGCAAGGAAGCGGCGCTCTTGGGCCATATCGTAATTCCGCTGAGCTCTATCGAGCAGCGAATCGACGAGCGCTACGTGCCAGCCAAGTGGTACCCATTAGAAGGAGGAGGTGGCGGCAATGGAGGAGGGTCCTACTGCGGGCGAGTCTACCTGCGCCTCTGCCTCGAAGGGGGCTATCACGTGCTCGACGAGGCTGCTCACGTGTGCAGCGACTTCCGCCCCACCGCAAAACAGCTCTGGAAACCCCCCATCGGAATCCTCGAACTCGGAATCCTGGGCGCCCGTGGCCTCCTCCCCATGAAATCCAAGGGCCCAGGAAAGGGCTCCACGGACGCTTACTGTGTGGCCAAGTACGGCAAGAAGTGGGTCAGAACCCGAACCGTAACCGACTCATTCGATCCACGCTGGAACGAGCAGTACACGTGGCAGGTCTACGACCCCTGCACGGTCCTGACCGTAGGAGTCTTTGACAACTGGCGCATGTTCGCTGACGTGGCAATGGACAAGCCCGACTGCCGTATCGGCAAGGTACGAATACGCGTATCTACCCTCGAGAGCAACAAGATCTACACAAGCTCATACCCTCTCTTGGTCCTATGCCGAACCGGGCTTAAAAAAATGGGAGAGATCGAGTTGGCGGTCCGGTTCGCATGCGCCTCCTTGCTTCCCGACACGTGCGCGGTGTACGGTCAGCCACTGCTGCCCAGAATGCACTACCTCCGCCCTCTCGGGGTGGCGCAGCAGGAGGCGCTGCGTGGCGCCGCCACGAAGATGGTGGCGCAGTGGCTGGGGCGGTCGGAGCCCCCTCTAGGGCACGAGGTGGTCCGTTACATGCTTGACGCGGACTCCCACGCGTGGAGCATGAGAAAATCAAAGGCCAATTGGTTTCGAATCGTGGCTGTTTTAGCTTGGGCGGTTGGGCTTGCAAAGTGGCTGGACGATATAAGAAGGTGGAAGAACCCATTAACTACCGTTCTGCTCCATATTTTATACCTAGTGCTTGTTTGGTACCCAGATTTGATTGTCCCCACAGGGTTCCTGTACGTGGTTTTGATTGGGATATGGTATTACCGGTTCAGGCCGAGAATACCGGCCGGGATGGATATCCGGTTGTCTCAGGCGGAAGCGGTTGACCCGGATGAGCTGGACGAGGAGTTCGACACGATGCCGAGTTCGAAGCCACCGGATGTGGTTCGGGTTCGGTATGACAGGTTGAGGATGCTGGCGGCACGGGTCCAAACTGTTTTGGGGGATTTTGCGACCCAAGGGGAGAGGATTCAGGCCCTGGTGAGTTGGAGGGACCCGCGGGCCACGAAGCTGTTCATTGGAGTGTGCCTTGCCATTACTATAACACTTTACGCGGTGCCGCCCAAGATGGTGGCGGTGGCATTGGGCTTTTACTATCTCAGGCATCCTATGTTCAGGGACCCTATGCCGCCCTCGAGTTTGAACTTTTTCCGCCGACTTCCCAGCTTGTCTGATCGCTTGATGTAG 1596 0.5777 MNNHSLSFHWNEDLLFVAGEPLEDSMILLVEDRTCKEAALLGHIVIPLSSIEQRIDERYVPAKWYPLEGGGGGNGGGSYCGRVYLRLCLEGGYHVLDEAAHVCSDFRPTAKQLWKPPIGILELGILGARGLLPMKSKGPGKGSTDAYCVAKYGKKWVRTRTVTDSFDPRWNEQYTWQVYDPCTVLTVGVFDNWRMFADVAMDKPDCRIGKVRIRVSTLESNKIYTSSYPLLVLCRTGLKKMGEIELAVRFACASLLPDTCAVYGQPLLPRMHYLRPLGVAQQEALRGAATKMVAQWLGRSEPPLGHEVVRYMLDADSHAWSMRKSKANWFRIVAVLAWAVGLAKWLDDIRRWKNPLTTVLLHILYLVLVWYPDLIVPTGFLYVVLIGIWYYRFRPRIPAGMDIRLSQAEAVDPDELDEEFDTMPSSKPPDVVRVRYDRLRMLAARVQTVLGDFATQGERIQALVSWRDPRATKLFIGVCLAITITLYAVPPKMVAVALGFYYLRHPMFRDPMPPSSLNFFRRLPSLSDRLM* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1709 531 ProSiteProfiles C2 domain profile. 102 228 IPR000008 -
Dod05g1709 531 CDD C2D_MCTP_PRT_plant 120 247 - -
Dod05g1709 531 Pfam C2 domain 7 67 IPR000008 -
Dod05g1709 531 Pfam C2 domain 119 230 IPR000008 -
Dod05g1709 531 Gene3D C2 domain 102 252 IPR035892 -
Dod05g1709 531 PANTHER BNAA10G16860D PROTEIN 1 531 - -
Dod05g1709 531 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 7 110 IPR035892 -
Dod05g1709 531 Gene3D C2 domain 2 100 IPR035892 -
Dod05g1709 531 Pfam Plant phosphoribosyltransferase C-terminal 376 531 IPR013583 -
Dod05g1709 531 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 1 531 - -
Dod05g1709 531 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 119 271 IPR035892 -
Dod05g1709 531 SMART C2_3c 120 227 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1709 Dod-Chr5 42465829 42467424 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1709 1 531 Lipid Metabolism Gene Families AT1G74720 82.994 0.0 931
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1709 - - adu:107467713 1025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1709 05 42465829 42467424 Dod05g1709 05 42465829 42467424 ECH