Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1707 ATGAGTAGGTGTCCGGGGCTATACTTTGATATTGGAAAGAAGGCCCGAGATGTTCTTCACAAAGACTATGCTCATCAATCACCAATTCACTTTCACTACCAGTTCATGGACTGGAACGTAGACCTCTCTTGTCAAGTAGAAGAAATTGTGCCTGGATTCAGGAGCCTTTTCACGTGTACCATACCTGATTCCGGGAAGGTGGAACTACAATACTTGAACAACTTCACCGGAATTACTGGATGCATTGGATTATTAGGAAACCAAAATGGAGGATATGACCCTGGTTTAAGCTTCTCTGGCCTTATAGGAACAAGCATTCTGTCCCTGGGAGCCAATGTTGCTTTTGACATACCAACAAGGACAATCAACAAGCTGAATGCTGGCTTAAGCTTCAACAGTGCCTTCCTTGTTGCTTCCTTGACCTTGAATGACAGGTTTGACACTCTGAAAGGCTCCTGTTATCATGAAGTTAATCCCCTGACCAAGACTGCAATTGCAGCAGAGGTGAAGCATAGCTTTTCAATCGGGGAGACTGGTGTCACCATTGGTGCTCAGCATGCATTTTTACCAGAAACACTAGTGAAGGCTCGACTTGACACCACCGGCAAGGTAGGTGCCCTTATTCAACAAGGTTTCTTGCAGAGATTTTTTGTAACTATGGCTGGAGAAATGGATTTTGGAGACTCAAATAAGCTTCCCAAAGTTGGAGTTTCCGTGGCTCTAAAACCTTAG 732 0.444 MSRCPGLYFDIGKKARDVLHKDYAHQSPIHFHYQFMDWNVDLSCQVEEIVPGFRSLFTCTIPDSGKVELQYLNNFTGITGCIGLLGNQNGGYDPGLSFSGLIGTSILSLGANVAFDIPTRTINKLNAGLSFNSAFLVASLTLNDRFDTLKGSCYHEVNPLTKTAIAAEVKHSFSIGETGVTIGAQHAFLPETLVKARLDTTGKVGALIQQGFLQRFFVTMAGEMDFGDSNKLPKVGVSVALKP* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1707 243 PANTHER PORIN/VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL PROTEIN 1 243 - -
Dod05g1707 243 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 1 243 IPR001925 GO:0005741|GO:0008308|GO:0098656
Dod05g1707 243 CDD Porin3_VDAC 5 242 IPR001925 GO:0005741|GO:0008308|GO:0098656
Dod05g1707 243 Pfam Eukaryotic porin 37 226 IPR027246 GO:0005741|GO:0055085
Dod05g1707 243 Gene3D Porin 3 242 IPR023614 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1707 Dod-Chr5 42458429 42460774 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1707 K15040 - gmx:100787061 382.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1707 05 42458429 42460774 Dod02g2512 02 55462929 55466183 ECH
Dod04g1049 04 30269742 30272679 Dod05g1707 05 42458429 42460774 ECH
Dod05g1707 05 42458429 42460774 Dod05g1707 05 42458429 42460774 ECH