Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1683 ATGGCACACCGCCCAACCCAGCGGCGGAACCACCTGGCACCTCAACAATCCAACCCTTCACCATCATCATCCACCATTGCAAAGCACCCCAAACCCACCACTCACCACTCAACACCAAACCCAGATCTCATAAGGCCTAATTCTAATTTCACGCTGCAACAACACTTCTCAAGCCTAAACTTGGGTCCCAGTCACAACAAAGCTCGTGCACCACCCCACACCAACCAATCCCAAATAATCACCAAACACAAACACCCTTCTCTTCTTGTGGACACCCGTTTGCGGGCTAAGGCCATGACATCCTCTGCCATGGTTGATTCCTCCAAATTCTCGCTTCTCAAACCCAATACCAACAACACCAGAGCTTTTGCACCAAAGCTTGAAAAGGATGGTGGTGGCACTAAGAGAAGTTCTGAAGAGAAGCCCCAGAAATCGAAGCTTCACGGGGGGTTGGTGAGGAACGAGAAGAAGAAGAACAAGGGTGGTTATTTGGCAGAGGATGATGATGTTGAGATTGAAAAGTCAAGCAGGAATCATGATTGTGATTATGGTGGTGATGATGTTGCCAAGAGAAGTTGCTCCTCTGTTTCTAAGGTGGCTCCGGGTGGTGATGGTACAAGGAGAAGGTCGTTGTGCGGGTCATCACTGGTTGATTTAAGGGATGTGTTTGCAATCAATGGGGTGAAAATGGTCTCAGCTGATATGCCACCGTTTATGCAGATCCATGCCGTCGATTCCGCCAGGAAGGCTTTTGATAGCATGGAGAAGTTCACCTCAAAGACCCTTGCATCCTCCCTCAAGAAGGAATTTGATGGGGTGTATGGGCCAGCGTGGCACTGTATAGTGGGGACTAGTTTTGGGTCTTTTGTGACCCATTCTGTTGGAGGGTTCCTATATTTCTCCATGGATCAGAAACTGTACATCCTCTTGTTTAAGACCGCTGTACAAAAGGTAAATTGA 960 0.4823 MAHRPTQRRNHLAPQQSNPSPSSSTIAKHPKPTTHHSTPNPDLIRPNSNFTLQQHFSSLNLGPSHNKARAPPHTNQSQIITKHKHPSLLVDTRLRAKAMTSSAMVDSSKFSLLKPNTNNTRAFAPKLEKDGGGTKRSSEEKPQKSKLHGGLVRNEKKKNKGGYLAEDDDVEIEKSSRNHDCDYGGDDVAKRSCSSVSKVAPGGDGTRRRSLCGSSLVDLRDVFAINGVKMVSADMPPFMQIHAVDSARKAFDSMEKFTSKTLASSLKKEFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSMDQKLYILLFKTAVQKVN* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1683 319 PANTHER INTRASTRAND CROSS-LINK RECOGNITION PROTEIN-LIKE 1 317 - -
Dod05g1683 319 Pfam Dynein light chain type 1 229 313 IPR001372 GO:0007017|GO:0030286
Dod05g1683 319 PANTHER DYNEIN LIGHT CHAIN 1 317 IPR001372 GO:0007017|GO:0030286
Dod05g1683 319 MobiDBLite consensus disorder prediction 9 82 - -
Dod05g1683 319 MobiDBLite consensus disorder prediction 121 148 - -
Dod05g1683 319 MobiDBLite consensus disorder prediction 128 148 - -
Dod05g1683 319 SUPERFAMILY DLC 226 313 IPR037177 GO:0007017|GO:0030286
Dod05g1683 319 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 224 314 IPR037177 GO:0007017|GO:0030286
Dod05g1683 319 SMART Dynein_light_2 223 313 IPR001372 GO:0007017|GO:0030286
Dod05g1683 319 MobiDBLite consensus disorder prediction 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1683 Dod-Chr5 42112903 42114725 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1683 - - aip:107633823 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1683 05 42112903 42114725 Dod05g1683 05 42112903 42114725 ECH