Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1671 ATGCCGTCACCGCAGAGCGTCAAGCAGAGGGTCCTCGCGTGCCTCGCCAAGCTCTCCGACCGAGACACTCACTCCATCGCCGCCGCCGACCTCGAGTCCATCGCCGTCAGCCTCGACACGACCACCATGCCGGCGTTCCTATCCTCCGTGCTCGCCACCGATTCCTCCGACAAAACCCTCGTTCGCAGGCAATGCGTGCAGCTCGTAGGGTTTCTCGCCGAGACACACGGAAACGTGCTGTCTCCCTACCTCTCCAGGATCCTAACCGCCGTCGTCCGCCGCCTCCGCGACCAGGACTCAACGGTCCGATCCGCGTGCGCTGATTCCGTTGCCGCATTGTCGCGCCACGTCGGCAAGCAGCCGTTCTTCTCGTCTTTCGCGAAGCCGTTATCGGAGGCGCTGTTCACGGAGCAGGACGCGAACGCGCAGGCAGGCGCTGCACTGTGCCTCGCCGCCGCGATCGGCGGAGCTCCGGATCCGGACCCTTCCAGGCTGGCGAAGCTGCTGCCGAGGTTCGAGAAGCTTCTGAAGCGCGACGGATTCAGGGCGAAGCCGGCGTTGCTGGCGCTGATGGCGAGTGTTGTACGCGCCGGCGGCGCGTCGAGCCACGCGGCGCTTAGGAACTTGGTTCATTGCTTGGTGGAGTCGTTGAGCAGCGAGGATTGGGCGGCGAGGAAGGCCGCGGCGGAGGCCCTGGCGGTGCTGGCAGACGTGGAGAGGGACTCCTTGTCGGAATTCAAGGCCGGGTGCTTGAAAGTTTTCGAGAATCGACGATTTGATAAGGTGAAGTTGGTTCGGGAAGTTATGAATCAGATGTTGGAGGCGTGGAAGCAGGTTCCTGATGTTTCGGATGAATTCTCGCCACCTCCTCAATTGCAATCTTCTTCCAAAGATAATGCAAGTGATGGGCGCTATCCCCCAGTTACTCGAAGTTCATGTAGTCCCGGTTCAATGATGGCGAATTTTCGGAAGAGATCCACTCCTGCTAGCAGATTCACTCCACCTGATAGTTCTTCTGCTAGCAATGCTAAGAATAATAGTCCTCTGAGTGTCAACAAGGGAGTGAGTTCGGTTCTTTCTCAGAAATTAAACCATAAGAATTGGGATGTTCAAATTGCCGGGTCAAATGTTTCCTCTGCTGTGATGGCTGATCATGGTGATCTTCAGGAGATGGATGAAACTGTTTTGGAAAGAAGCAAAAAGGATAGAAACAGACTTTTAAAACCAGATATAAAACGGGCTCTATTCAGTAAAAATCCTGACGAAAAAATGCAGAAGTTTGCTGGGTCCAAAGGTGGATCTCGTGTGGTTCCATATCATGAAGAAAGTCAAGACTCAGTTCCTGCCAGTAATGCCACTAAAGATCTCCTTCTGAGTGACAAAGAGAGTGAAGATTTATCTTTGATCCGTGACCAGTTACATCAGATTGAGAAGCAGCAGTCAAGTCTACTTGACCTCCTTCAGAAATTCATTGGAAGCTCAATGAATGGAATGCGTTCTTTGGAGACTCGTGTACACGGCCTCGAGTTGGCATTGGATGAGATTTCTTATGATTTAGCTCTATCAAGTGGAAGGATGACTAATTCTGCTGCTCCTGGTAATACATGTTGCTTGCTGGCTGGAGCTGAATTTTGGAGCCCTAAATTCTGGAGGAAAACACAGGGACGGTATTCGTCCTCTCGATTCTCTAGATCTGGTGCCACTGCATCACTAGCTGCCATGCACTACAATGCTGACAGGAATGCTGAGGCTAAGTTGACCAGTCACAGATTCAGGCTTGATGGAAGCTTCATCACTAATCCACTAGCAGAGGTTCATACTAATTTGAGGGATTTTGCAAGATCACAGCGAGTTTAA 1857 0.525 MPSPQSVKQRVLACLAKLSDRDTHSIAAADLESIAVSLDTTTMPAFLSSVLATDSSDKTLVRRQCVQLVGFLAETHGNVLSPYLSRILTAVVRRLRDQDSTVRSACADSVAALSRHVGKQPFFSSFAKPLSEALFTEQDANAQAGAALCLAAAIGGAPDPDPSRLAKLLPRFEKLLKRDGFRAKPALLALMASVVRAGGASSHAALRNLVHCLVESLSSEDWAARKAAAEALAVLADVERDSLSEFKAGCLKVFENRRFDKVKLVREVMNQMLEAWKQVPDVSDEFSPPPQLQSSSKDNASDGRYPPVTRSSCSPGSMMANFRKRSTPASRFTPPDSSSASNAKNNSPLSVNKGVSSVLSQKLNHKNWDVQIAGSNVSSAVMADHGDLQEMDETVLERSKKDRNRLLKPDIKRALFSKNPDEKMQKFAGSKGGSRVVPYHEESQDSVPASNATKDLLLSDKESEDLSLIRDQLHQIEKQQSSLLDLLQKFIGSSMNGMRSLETRVHGLELALDEISYDLALSSGRMTNSAAPGNTCCLLAGAEFWSPKFWRKTQGRYSSSRFSRSGATASLAAMHYNADRNAEAKLTSHRFRLDGSFITNPLAEVHTNLRDFARSQRV* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1671 618 Gene3D - 3 426 IPR011989 -
Dod05g1671 618 MobiDBLite consensus disorder prediction 287 352 - -
Dod05g1671 618 PANTHER TORTIFOLIA1-LIKE PROTEIN 3 5 612 - -
Dod05g1671 618 MobiDBLite consensus disorder prediction 427 452 - -
Dod05g1671 618 SUPERFAMILY ARM repeat 6 462 IPR016024 -
Dod05g1671 618 ProSiteProfiles HEAT repeat profile. 87 125 IPR021133 -
Dod05g1671 618 MobiDBLite consensus disorder prediction 281 352 - -
Dod05g1671 618 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 5 612 IPR033337 GO:0005874|GO:0008017
Dod05g1671 618 Pfam HEAT repeat 209 237 IPR000357 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1671 Dod-Chr5 41979119 41982759 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1671 - - gmx:100789197 830.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1671 05 41979119 41982759 Dod05g1671 05 41979119 41982759 ECH
Dod05g1671 05 41979119 41982759 Dod09g0341 09 5125793 5131409 PCT