Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1658 ATGCTGCTGCTTTGTAACACTCGCTGCTGCATGCTTTCCAACTCGCACTTCTTTTCTCCTCGCACTTTCTTCAAACACCTTACCTCACAAAAATCCACCGCACTCTGCCACCGCAAAACCGCCTCCAAATGCATCGCCACTCTCTCCCACTTCCAAACCCTAACCTCCCGCCAGCAAAACCAGCTTCATCTCTACGTCGACGCTCTTCTCCAATGGAACAAGGTATATATATGCATTCTTCTTTCTCTCTCAATAATCTCTCTGAATGGCATACAACACTTATTTGCATTTGCATATTACGATTGCAAATCGCAGCGCATGAATCTGACCGCAGTTAAAGATGTGGACGAAGTCATGGAGAGGCACGTGGAGGACTCGCTTGCGATGTTGCCTCCTCTCAGGGATTGTTACCGCAGGAGCTGGGGCGCCGCGTCCTGCGACGATAAGCTCAGCGTCATCGACGTCGGAACCGGTGCGGGCCTTCCCGGAGTGGTTTTGGCCATAGCTTGCCCAGAATGGGATGTGACGCTGCTGGAGCCCATGAACAAGCGATGCGTATTCTTGGAGCACGTTGTTGGTGTCATCGGTTCCTCAAACATTCATATTGTAAGAGGAAGGGCTGAGAGTTTGGGGCAGAATCTTTGCTACAGAGAGCAATTTGACATAGCAGTGGCCAGGGCAGTTGCAGAAATGAGAGTATTAGCTGAGTATTGTCTGCCATTGGTTCGTGTTGGTGGGTTGTTTATTGCTGCTAAGGGTCATGATCCCAAGGATGAAGTTAAGAAAGCTGAAAATGCCATCCAAAAGTTGGGTGCATCTCTGTTGCAAGTGTGCTCAGTTGAATCTCGAAGTCCACATGGTCAGCGAACTGCTGTCATATGTTTAAAGGATCGTCCCACCCCAATGAAATATCCCCGTGATCCAGTCATCACACGAAACGCATACCATCCACTATTGCTACTACTAAACAGTGACACAACCCCCAAATTAAAGGTGAAGGTGAACAATGACGGGGGAGTGCGTTGA 1026 0.4903 MLLLCNTRCCMLSNSHFFSPRTFFKHLTSQKSTALCHRKTASKCIATLSHFQTLTSRQQNQLHLYVDALLQWNKVYICILLSLSIISLNGIQHLFAFAYYDCKSQRMNLTAVKDVDEVMERHVEDSLAMLPPLRDCYRRSWGAASCDDKLSVIDVGTGAGLPGVVLAIACPEWDVTLLEPMNKRCVFLEHVVGVIGSSNIHIVRGRAESLGQNLCYREQFDIAVARAVAEMRVLAEYCLPLVRVGGLFIAAKGHDPKDEVKKAENAIQKLGASLLQVCSVESRSPHGQRTAVICLKDRPTPMKYPRDPVITRNAYHPLLLLLNSDTTPKLKVKVNNDGGVR* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1658 341 TIGRFAM rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 105 291 IPR003682 GO:0005737|GO:0006364|GO:0008649
Dod05g1658 341 Pfam rRNA small subunit methyltransferase G 105 282 IPR003682 GO:0005737|GO:0006364|GO:0008649
Dod05g1658 341 CDD AdoMet_MTases 152 249 - -
Dod05g1658 341 Hamap Ribosomal RNA small subunit methyltransferase G [rsmG]. 51 293 IPR003682 GO:0005737|GO:0006364|GO:0008649
Dod05g1658 341 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 105 311 IPR003682 GO:0005737|GO:0006364|GO:0008649
Dod05g1658 341 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 6 74 IPR003682 GO:0005737|GO:0006364|GO:0008649
Dod05g1658 341 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 100 306 IPR029063 -
Dod05g1658 341 Gene3D Vaccinia Virus protein VP39 46 318 IPR029063 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1658 K03501 - gmx:100818428 398.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1658 05 41836223 41852765 Dod05g1658 05 41836223 41852765 ECH