Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1655 ATGTTTCCCCGCAATCCCAAGACATGCCTTCTCCTCCTCGTCCTCGTACTCTCCACCTCCATCTCCGCCTCTCAATCCCCTTGGGCTGCCAAGAAAATCCTCATGAGAGAGAAAGTTCGCACTATGTTTTACCATGCGTATGACAACTATATGATTTATGCATTTCCGCATGATGAACTAAAGCCTCTCACTAAAACTTACAGCAACTCCTTAAGTGAGCTGGGAAATTTGAAGCTTGAACGCTTGCCTCATGACTACAATGGCTCCGCCCTTACACTTATTGAATCACTGTCTAGCCTTGTTATTATGGGAAACAATACTGAGTTTGAGAAGGCAGTGCTCTGGCTTTCCGAAAATCTAACATTTGACGTTGATGCACGCGTAAATCTTTTTGAGTGCAACATTAGAGCTCTTGGTGGACTTGTCTCTGCTCATTTACTTGCATCTGATACTTCAAAGAAGTTGTTTCAAGGGGCTTATAATAATCAGCTGCTAGTTCTGGCTGAAGATTTAGGGAAACGCTTTCTACCAGCATTCAATACGCCCACTGGATTGCCATATGCATGGATTAACTTAAAGTATGGAGTAATGGAGAATGAGACTACAGAAACAAGCACTTCAGGGTGTGGTTCTCTGATTCTTGAAATGGGTACTTTATCAAAAATGACTGGTGACCCCATATATGAATCAGTAGCTTTACGAGCTCTTCGTAAGCTATGGAGCATGCAGAGCTCAATACATTTATTTGGAACCACATTGGACGTGGCAACTGGGGAATGGATTGAATTTTCATCAGGAATTGGAGCTGGGGTTGATTCCTTCTATGAGTATCTACTTAAAGCCCATATCCTTTTCGGGAAGGAAGACTTTTGGAGAATGTTTCATTCTGCTTATGTTGCTGTGCAGAAATATTTCAGACATGGTCCTTGGTACCATGAAGCTGATATGAGGACAGGAAAAGCTACTTATTGGCAGCTTACTAGTCTTCAAGCATTTTGGCCTGGCCTACAGGTTCTTATTGGGGATGTTGCAGCTGCTAATTCATCTCACCGTGAGTTCTTCCATGTGTGGAATAGATTTGGTGTACTACCTGAGAGGTATTTGCTGGACCATCAGATGATTCACCCTACTGAAAAATATTATCCATTACGTCCTGAATTGGCTGAGTCAACATTCTACTTATATCAAGCAACTAAAGATCCATGGTATATGGAAGTGGGTGAATCAATAGTCAATTCCCTAAATTTATACACCAAAGTAGAAGGTGGGTTTGCAAGCATCAAGGATGTGACAACTATGCAGTTGGAAGATCATCAACATAGTTTTTTTCTTGCTGAAACGTGTAAATATTTATATCTTCTATTTGATGATTCATTTTTATTTGAGAATAATTACATATTTACCACCGAAGGTCATCCCCTTCCAGTACTTAGCTCTTGGCATGAAAAGCTTCCAGAAACTTACATTCCTACTAATTGGACTTTCATGAAGAGGCAAGCAGCACCAAATAGAATCAGTGCAATGTCTTTGCAAGTATGTCCTGCTATGACTTTAAATTCAGGTAAACACATTGAGAGTGCTTGCCACATCCCCGACACTCGTCATGATTATAGATGTTTGACTGATGAGGATTGTGGAGTTGATTCCACTACATGTAGACGGAGATCTTGTAGCATGGCTGGTTATTGTGGACTATGGCTCTTTATATGA 1710 0.4094 MFPRNPKTCLLLLVLVLSTSISASQSPWAAKKILMREKVRTMFYHAYDNYMIYAFPHDELKPLTKTYSNSLSELGNLKLERLPHDYNGSALTLIESLSSLVIMGNNTEFEKAVLWLSENLTFDVDARVNLFECNIRALGGLVSAHLLASDTSKKLFQGAYNNQLLVLAEDLGKRFLPAFNTPTGLPYAWINLKYGVMENETTETSTSGCGSLILEMGTLSKMTGDPIYESVALRALRKLWSMQSSIHLFGTTLDVATGEWIEFSSGIGAGVDSFYEYLLKAHILFGKEDFWRMFHSAYVAVQKYFRHGPWYHEADMRTGKATYWQLTSLQAFWPGLQVLIGDVAAANSSHREFFHVWNRFGVLPERYLLDHQMIHPTEKYYPLRPELAESTFYLYQATKDPWYMEVGESIVNSLNLYTKVEGGFASIKDVTTMQLEDHQHSFFLAETCKYLYLLFDDSFLFENNYIFTTEGHPLPVLSSWHEKLPETYIPTNWTFMKRQAAPNRISAMSLQVCPAMTLNSGKHIESACHIPDTRHDYRCLTDEDCGVDSTTCRRRSCSMAGYCGLWLFI* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1655 569 PRINTS Glycosyl hydrolase family 47 signature 325 341 IPR001382 GO:0004571|GO:0005509|GO:0016020
Dod05g1655 569 PRINTS Glycosyl hydrolase family 47 signature 127 145 IPR001382 GO:0004571|GO:0005509|GO:0016020
Dod05g1655 569 PRINTS Glycosyl hydrolase family 47 signature 268 285 IPR001382 GO:0004571|GO:0005509|GO:0016020
Dod05g1655 569 PRINTS Glycosyl hydrolase family 47 signature 382 406 IPR001382 GO:0004571|GO:0005509|GO:0016020
Dod05g1655 569 PRINTS Glycosyl hydrolase family 47 signature 441 461 IPR001382 GO:0004571|GO:0005509|GO:0016020
Dod05g1655 569 PRINTS Glycosyl hydrolase family 47 signature 177 196 IPR001382 GO:0004571|GO:0005509|GO:0016020
Dod05g1655 569 PRINTS Glycosyl hydrolase family 47 signature 42 62 IPR001382 GO:0004571|GO:0005509|GO:0016020
Dod05g1655 569 Gene3D - 25 487 IPR012341 GO:0005975
Dod05g1655 569 PANTHER ALPHA-MANNOSIDASE I MNS5 14 568 - -
Dod05g1655 569 SUPERFAMILY Seven-hairpin glycosidases 35 489 IPR036026 GO:0004571|GO:0005509|GO:0016020
Dod05g1655 569 Pfam Glycosyl hydrolase family 47 42 475 IPR001382 GO:0004571|GO:0005509|GO:0016020
Dod05g1655 569 PANTHER ER DEGRADATION-ENHANCING ALPHA-MANNOSIDASE-LIKE PROTEIN 2 14 568 IPR044674 GO:0004571|GO:1904380|GO:1904382
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1655 Dod-Chr5 41811394 41819478 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1655 3 566 Glycoside Hydrolase AT1G27520 76.056 0.0 913
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1655 K10084 - gmx:100793674 1038.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1655 05 41811394 41819478 Dod05g1655 05 41811394 41819478 ECH