Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1649 ATGGGAGACAACAAACGTAAGAGAGGTCGAAAACCCAAAAGCCCCGCCCGCGAAACCCTAGACCTCCCCACCACAACCACCACCGCTGCCCCCAGCAACGCCGCCAGCCCTTCAGCCATGGACGACGTCTTCTCCGTCGCCGGCGTCGAGCTCATCGACTCCACCGCTTCCCCCAGCCTCCGACACCGCCGCGGCCGCCCCAAGAAGCTCCCCAACCACTCCGACAGGGTCGCGGGCCGCCGCCCCGCCCGCCCCCCGGTCGACTCCAACGGCGCCGCCGCAGCCATGGAGGTACCCGCGGCGGAGGACCAGGTGTGGGAGAGCGTGGCGGCGCGTGTGATGCTGGCGATGGACTCGGTGGTCAAAGTGTTCTGCGTGCACACGGAGCCGAATTTCTCGCTGCCGTGGCAGCGGAAGAGGCAGTACAGCTCGAGCAGCAGCGGGTTCGTGATTGATGGGAGGAGGGTCCTCACGAATGCGCATTCCGTGGAGCACTACACTCAGGTCAAGCTCAAGAAGCGTGGTTCTGATACCAAGTACTTGGCCACTGTGCTCGCCATTGGAACCGAATGCGACATTGCCATGCTTACAGTTGATGATGATGAGTTCTGGAAAGGGATGTCACCTGTGGAGTTTGGGGATCTGCCCACTCTTCAGGATGCTGTCACTGTTGTGGGATACCCGATTGGTGGAGACACTATTTCTGTGACCAGTGGTGTTGTATCACGCATTGAGATTCTATCTTATGTTCATGGTTCCACTGAACTTCTAGGTTTACAGATAGATGCTGCCATAAATTCTGGCAATTCTGGTGGGCCTGCATTTAATGATAAAGGAAACTGCGTGGGGATTGCATTCCAATCCCTCAAGCATGAAGATGTGGAGAATATAGGTTATGTCATTCCAACACCAGTTATCATGCATTTCATCCAGGATTATGAGAAGAATGGAAGATATACTGGGTTCCCTATTCTTGGGGTTGAGTGGCAGAAAATGGAAAACCCTGATCTGCGAATGGCAATGGGCATGAAACATGATCAAAAAGGTGTGCGGGTTAGAAGAGTTGATCCTACTGGTCCAGAATCTAAGGTTTTGAAGCCATCAGATGTTATCCTTAGCTTTGATGGGGTTGATATTGCCAATGATGGAACAGTGCCATTTCGTCATGGAGAGCGCATTGGTTTCAGTTATCTCATATCCCAGAAATATACTGGGGATAAAGCAAAAATTAAAGTGTTACGAAATTCAGATATTCTCAAATCTGAAATTAAACTTGATAGTCACAGAAGGCTCATTCCAGCACACAGCAAGGGCAGGCCTCCCTCATATTATATCATTGCAGGATTTGTTTTTACTACTGTTTCAGTTCCATATCTTCGTTCTGAGTATGGAAAGGATTATGAGTATGAAGCTCCAGTCAAGCTTTTGGACAAACTGCTGCATTCTATGCCACAATCACCAGATGAACAACTTGTTGTGGTCTCTCAGGTGCTGGTGGCTGATATCAATATTGGATATGAAGATATCGTTAACACCCAGGTCCTTGCTTTTAATGGTAAACCTGTGAAAAATCTCAAGAGCTTGGCCGCCATGGTAGAGAGCTGCGATGATGAATACCTGAAATTTGAATGTAGACTATGA 1641 0.5003 MGDNKRKRGRKPKSPARETLDLPTTTTTAAPSNAASPSAMDDVFSVAGVELIDSTASPSLRHRRGRPKKLPNHSDRVAGRRPARPPVDSNGAAAAMEVPAAEDQVWESVAARVMLAMDSVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFVIDGRRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIAMLTVDDDEFWKGMSPVEFGDLPTLQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGNCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEKNGRYTGFPILGVEWQKMENPDLRMAMGMKHDQKGVRVRRVDPTGPESKVLKPSDVILSFDGVDIANDGTVPFRHGERIGFSYLISQKYTGDKAKIKVLRNSDILKSEIKLDSHRRLIPAHSKGRPPSYYIIAGFVFTTVSVPYLRSEYGKDYEYEAPVKLLDKLLHSMPQSPDEQLVVVSQVLVADINIGYEDIVNTQVLAFNGKPVKNLKSLAAMVESCDDEYLKFECRL* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1649 546 MobiDBLite consensus disorder prediction 54 91 - -
Dod05g1649 546 SUPERFAMILY PDZ domain-like 348 430 IPR036034 GO:0005515
Dod05g1649 546 PRINTS HtrA/DegQ protease family signature 148 160 IPR001940 GO:0004252|GO:0006508
Dod05g1649 546 PRINTS HtrA/DegQ protease family signature 176 196 IPR001940 GO:0004252|GO:0006508
Dod05g1649 546 PRINTS HtrA/DegQ protease family signature 364 376 IPR001940 GO:0004252|GO:0006508
Dod05g1649 546 PRINTS HtrA/DegQ protease family signature 218 242 IPR001940 GO:0004252|GO:0006508
Dod05g1649 546 PRINTS HtrA/DegQ protease family signature 255 272 IPR001940 GO:0004252|GO:0006508
Dod05g1649 546 Gene3D - 431 545 IPR046449 -
Dod05g1649 546 Pfam Trypsin-like peptidase domain 147 284 - -
Dod05g1649 546 Pfam PDZ domain 325 425 IPR001478 GO:0005515
Dod05g1649 546 PANTHER PROTEASE DO-LIKE 9 4 544 - -
Dod05g1649 546 MobiDBLite consensus disorder prediction 1 38 - -
Dod05g1649 546 Gene3D - 204 315 IPR043504 -
Dod05g1649 546 PANTHER - 4 544 - -
Dod05g1649 546 SUPERFAMILY Trypsin-like serine proteases 115 318 IPR009003 -
Dod05g1649 546 MobiDBLite consensus disorder prediction 19 38 - -
Dod05g1649 546 Pfam PDZ domain 432 544 IPR041517 -
Dod05g1649 546 Gene3D - 321 430 IPR036034 GO:0005515
Dod05g1649 546 Gene3D - 97 203 IPR043504 -
Dod05g1649 546 CDD PDZ_serine_protease 323 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1649 Dod-Chr5 41626774 41635006 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1649 K25897 - gmx:100791040 896.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1649 05 41626774 41635006 Dod05g1649 05 41626774 41635006 ECH