Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1640 ATGCGATCATCCCGTGCTTTCACTGTCTTCGCCCTCTTACTCCTTTCCTCTGCCATTCCCTCTATTCAGGGACAAGCATCAAGTAAGCTTCACTTCAAATCGTTGTCGCCGTTTTCAACGGCTCTCGAAGCCCTCCAGGAACAACTCGGTTACACCTTCGACAAAATGAGTCTTCTTCGTCGTGCCATGACCCATGCTTCCTTCTCGGAGGACCACAACAAAGCTCTGAGCATTCTGGGGGGCAGCATCATCGAAACAACATTGTCCTTTCTGCTGCTGTCGAAGGACATTGATTTTTCGGCGAAGGAGCTGAAGCATCGGATATCGCAAGTCTCCGATGTGGAGTCTTCTTGTGCCGTGGATGGAATGCGGTTGGGCCTGCACAAGGTTGTCAGAGTCTCGACAAAGACCAATGCTTCCGCGCCCGCCGTGGTTTGCGGCGCGTTTCGAGCAATCTTTGCTGCTATTGCTGTTGATACCGCCAAAACTGATGCTGCTGGAAATGTCTTCTGGACCATCCATGATGAGCTTGAGGATGCACTAGCTATGTGA 552 0.5127 MRSSRAFTVFALLLLSSAIPSIQGQASSKLHFKSLSPFSTALEALQEQLGYTFDKMSLLRRAMTHASFSEDHNKALSILGGSIIETTLSFLLLSKDIDFSAKELKHRISQVSDVESSCAVDGMRLGLHKVVRVSTKTNASAPAVVCGAFRAIFAAIAVDTAKTDAAGNVFWTIHDELEDALAM* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1640 183 Gene3D Ribonuclease III domain 40 181 IPR036389 GO:0004525|GO:0006396
Dod05g1640 183 Pfam Ribonuclease-III-like 57 169 IPR000999 GO:0004525|GO:0006396
Dod05g1640 183 PANTHER RIBONUCLEASE 3 33 161 - -
Dod05g1640 183 SUPERFAMILY RNase III domain-like 35 177 IPR036389 GO:0004525|GO:0006396
Dod05g1640 183 ProSiteProfiles Ribonuclease III family domain profile. 42 161 IPR000999 GO:0004525|GO:0006396
Dod05g1640 183 PANTHER RIBONUCLEASE III 33 161 IPR011907 GO:0003723|GO:0004525|GO:0006364
Dod05g1640 183 SMART riboneu5 57 183 IPR000999 GO:0004525|GO:0006396
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1640 Dod-Chr5 41573423 41574729 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1640 - - aprc:113847954 238.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1640 05 41573423 41574729 Dod05g1640 05 41573423 41574729 ECH