Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1621 ATGGCTCTCCATTTGCCTTCCCCAGTTGAAGTGAAGTCAAGTTTTTTCACTGATTCCTTCAAGCCAAACAGCGTCACTGCAAAATTCCCAGGTGGTATTGCTTTGAAAAGAAGAGATTGTGGAGCAGGAACTGGAAGAAGAGTTTATTGCTCAATGCAGGCACCACCACCACCACCAGCCTGGCCAGGAAGAGCGGTTCCTGAATCAGGCCGCAAGACTTGGGAGGGTCCAAAACCCATTTCCATAGTGGGATCTACTGGTTCAATTGGAACTCAGACACTTGATATTGTGGCCGAGAATCCAGATAAGTTTAAAGTTGTGGCACTTGCGGCTGGTTCCAACGTTACTCTTCTTGCAGATCAGGTAAAAAGATTTAAACCTCAACTTGTTTCTGTTAGAAATGAGTCCCTAATTGCTGAACTTGAAGAGGCTTTGGCTGATGTTGAACAAAAACCTGAGATCATCCCTGGAGAGCAGGGAATCATTGAGGTTGCTCGTCACCCGGATGCAGTCACAGTAGTCACAGGAATAGTAGGCTGTGCAGGACTCAAGCCAACTGTTGCTGCAATAGAAGCAGGGAAAGACATAGCATTGGCCAACAAAGAGACACTTATTGCTGGAGGTCCTTTTGTTCTTCCTCTTGCGCATAAGCATAATATAAAAATACTCCCTGCAGATTCAGAACATTCTGCCATTTTTCAGTGTATCCAGGGGTTGCCAGAGGGTGCACTTAGGACGATTATTTTAACTGCATCTGGAGGTGCTTTCAGGGATTTGCCTGTTGAGAAACTGAAAGATGTTAAAGTTGCTGATGCATTAAAACATCCCAACTGGAATATGGGAAAAAAGATAACTGTGGACTCTGCTACGCTTTTCAATAAGGGTCTAGAAGTAATTGAAGCACATTACTTGTTTGGAGCAGACTATGATAATGTTGAGATTGTAATTCATCCACAATCGATCATACATTCAATGGTTGAAACACAGGATTCATCAGTTTTGGCGCAGTTGGGGTGGCCTGATATGCGTTTACCAATCCTCTATACATTATCATGGCCTGACAGAATTTACTGCTCTGAAGTAACTTGGCCACGTCTTGATCTTTGCAAGCTTGGTTCACTAACATTTAAAGCTCCTGACAACATTAAATATCCATCCATGAATCTCGCCTATGCTGCTGGCCGTGCTGGAGGCACAATGACAGGAGTTCTTAGTGCAGCAAATGAGAAAGCTGTAGAGATGTTTATTGATGAAAAGATCAACTATTTGGATATTTTCAAGGTTGTGGAGCTAACATGTGAGAAGCATCAAGATGAATTGGTATCCACGCCCTCCCTTGAGGAAATTATTCACTATGACCTTTGGGCTCGAGAATATGCCGCTAGTTTGCAGAGCTCTTCAAGCAGGAGTCCTGTTCCTGCGTGA 1425 0.4372 MALHLPSPVEVKSSFFTDSFKPNSVTAKFPGGIALKRRDCGAGTGRRVYCSMQAPPPPPAWPGRAVPESGRKTWEGPKPISIVGSTGSIGTQTLDIVAENPDKFKVVALAAGSNVTLLADQVKRFKPQLVSVRNESLIAELEEALADVEQKPEIIPGEQGIIEVARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRTIILTASGGAFRDLPVEKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGADYDNVEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTLSWPDRIYCSEVTWPRLDLCKLGSLTFKAPDNIKYPSMNLAYAAGRAGGTMTGVLSAANEKAVEMFIDEKINYLDIFKVVELTCEKHQDELVSTPSLEEIIHYDLWAREYAASLQSSSSRSPVPA* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1621 474 Gene3D - 382 467 - -
Dod05g1621 474 PIRSF Dxp_reductoisomrs 77 470 IPR003821 GO:0008299|GO:0030604|GO:0046872
Dod05g1621 474 Hamap 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 80 463 IPR003821 GO:0008299|GO:0030604|GO:0046872
Dod05g1621 474 Pfam 1-deoxy-D-xylulose 5-phosphate reductoisomerase 80 208 IPR013512 GO:0070402
Dod05g1621 474 PANTHER 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE 1 467 IPR003821 GO:0008299|GO:0030604|GO:0046872
Dod05g1621 474 PANTHER 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE-RELATED 1 467 - -
Dod05g1621 474 Pfam 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain 222 305 IPR013644 GO:0005515
Dod05g1621 474 Coils Coil 131 151 - -
Dod05g1621 474 Pfam DXP reductoisomerase C-terminal domain 337 458 IPR026877 -
Dod05g1621 474 SUPERFAMILY 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 370 464 IPR036169 -
Dod05g1621 474 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 203 340 - -
Dod05g1621 474 MobiDBLite consensus disorder prediction 53 73 - -
Dod05g1621 474 TIGRFAM Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 78 460 IPR003821 GO:0008299|GO:0030604|GO:0046872
Dod05g1621 474 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 77 226 IPR036291 -
Dod05g1621 474 Gene3D - 71 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1621 Dod-Chr5 41300745 41306083 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1621 K00099 - gmx:100790607 823.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1621 05 41300745 41306083 Dod05g1621 05 41300745 41306083 ECH