Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1619 ATGGAACGGACGAATTACGATTCCACAAACCTAGCATCGGAGATATCGGTCTCCGATTTCTCCGGCGACGATGACTCGGTGGTTTCCGATTGCGAGAGCGGCGTCTCCGGTCAATCTGTTCGCCGGCGCAGCCGCCACCGCCACAACGTGTTCGATGCAAGGCTCGTGAGGCTCTCCGAAGGAGACAGGGCGCGCGAACTCATCCAGAGCAGGTTCATTCGTGGATTGGCGGCATCATCGCTCGGGGTCAAAGCCGACGTCGTTTCGGTCCACAGGAACGCGTGCCGCTCCGTGATGGCGCAGGCGCGTGTACAGTGCTTCCAGATCTTCGCGCGTGCTGTGGCCAAGTTGCGCGGCGGCGATCCGAACGTGAAGTACGCGTGGTACGGTGCTTCCGGTAAGGAAGAAGTGACCGACATCATCGAACACGGTTTCGGAACGAAGCCAGCTCTTAATAATGGACTTCGTCTTTCGCCAGATGATTCTCCTCTCAAAAGTGTGAAAAGGTGTGGTATTGACAAAGACGGTGTGAGGCACGTGCTGCTGTGCCGCGTTATCTTGGGGAGGGTGGAGTCGGTGCAGCCTGGCTCCGACCAATGCGGTTCGAGCTCTGAGGATTACGATTCCGGTGTGGACAGTGTTTCAGCCCCCAAGGAGTACATTGTTTGGGGTTCCCGGATCAATACTCATGTCTTGCCCGAATTTGTTATAAGCTTCAAACTTCCTTCCTCTAAAGGGCATATGAGGATTGAAGAGCCTGTGAGGCCGTCTTCTCCTTGGATGCCATTCCCAGCTCTAATTTCTGTTCTTTCCAAGGTTTTGCCTTCATCTGACATTGCCTTGATCTCCAAGTTTCACAGAGATTATAAAGAAAAGAAGATTTCACGGCGTGAATTGATACAGAAAGTGAGGACAATAGCGGGAGACAAACTGCTGGTTTCAGTCATCAAATCTTTTAGAGAGAAGGTACATCTCTCTTTTGTTTTTTCTCTCGCCCTGGTGATTTTGATCTACATTTTGATTAAGGATGCGTTTCTTGCACTTCTGTTTGTCTATAAAGTAACAAACACTGGACATGCTAGTCCTCTAGATCAACATTGA 1101 0.5095 MERTNYDSTNLASEISVSDFSGDDDSVVSDCESGVSGQSVRRRSRHRHNVFDARLVRLSEGDRARELIQSRFIRGLAASSLGVKADVVSVHRNACRSVMAQARVQCFQIFARAVAKLRGGDPNVKYAWYGASGKEEVTDIIEHGFGTKPALNNGLRLSPDDSPLKSVKRCGIDKDGVRHVLLCRVILGRVESVQPGSDQCGSSSEDYDSGVDSVSAPKEYIVWGSRINTHVLPEFVISFKLPSSKGHMRIEEPVRPSSPWMPFPALISVLSKVLPSSDIALISKFHRDYKEKKISRRELIQKVRTIAGDKLLVSVIKSFREKVHLSFVFSLALVILIYILIKDAFLALLFVYKVTNTGHASPLDQH* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1619 366 Gene3D - 52 241 - -
Dod05g1619 366 ProSiteProfiles PARP catalytic domain profile. 38 261 IPR012317 GO:0003950
Dod05g1619 366 SUPERFAMILY ADP-ribosylation 55 244 - -
Dod05g1619 366 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 20 332 IPR044964 -
Dod05g1619 366 Pfam RCD1-SRO-TAF4 (RST) plant domain 255 320 IPR022003 -
Dod05g1619 366 ProSiteProfiles RST domain profile. 254 325 IPR022003 -
Dod05g1619 366 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4 20 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1619 Dod-Chr5 41279589 41283716 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1619 - - adu:107491749 450.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1619 05 41279589 41283716 Dod09g0285 09 4386313 4391744 PCT