Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1588 ATGGACATGAAGGGATATTCAGTTCCCTGGACAAAACACAAGAATGAGCCATTTTTTGCAGCTCATCACACAACAAGACAACACCAATGCATACAACCAAATCATGCTGCCCCAGAACAAACAAGCTCACAAAATCATTACCTGAAATTGGCTGCTTCCAATTCCAAAAATACTATTATTATACCTATGCTACCTGCCCTTGTTTCTTTGCTGCTTCTTGTTACTTCAATTAGTCCTGTGTTGTCTTCACCAGTTCTTTCTCACTCTTACCCCATTGCAAACCAGACTTTTAGGCCAGTGTTGCATAAGTTGAGGAGAATAAGAGCTCATTTGAACAAGATCAACAAGCCTGGTGTCAAGACAATTCAGGCATTTTACTTTGCTTTGGAAGCTGTGACACAAGTCCTAGATGGGGACTTGATAGATTGTGTTTTATCTCATCACCAGCCAGCTTTTGACCATCCTGTGCTTAAAGGACAAAGACCATTGGATCCACCAGAGAGGCCAAAGGGATACTACGCCAATGGAGAAAATGTAAGTGAGAGCTTTCAGCTTTGGAGTGATTCTGGTGAAGCATGTCCAGAAGGAACTGTTCCAATCAGAAGAACAACTGAGCAAGATTTTCTAAGAGCAAGTTCAATCAGAAGATTTGGAAGAAAGCCAAGAGCTGTAAGGAGAGACTCAACAGCCACTGGTCATGAGCATGCAGTTGTTTTTGTAAATGGAGATCAATACTATGGAGCAAAAGCAAGCATAAACGTGTGGACACCGGTGGTAACTGATCAATTCGAATTCAGCTTGTCACAGATATGGGTTATTGGTGGATCCTTTGATAATGATCTCAATACAATAGAAGCTGGATGGCAGGCATGTCCAATTCTCCATACTTGTTTGAAACTTATCCTAGTAAGTCCTGAGCTATATGGGGACAACTATCCTAGGTTCTTCACTTATTGGACAACAGATGCATATCAAGCAACTGGGTGCTACAACTTGCTATGTTCAGGATTTGTCCAAACCAACAACAGGATAGCAATAGGGGCTGCAATCTCCCCAAGATCCGTCTATAATGGGAGACAATTTGACATTGGCTTAATGGTTTGGAAGGACCCTAAGCATGGACATTGGTGGTTAGAGTTTGGGTCAGGGCTACTAGTTGGGTACTGGCCAGCATTCTTGTTTAGTCGCTTGAGAAGCCATGCAAGCATGGTGCAATTTGGTGGAGAAATTGTGAATTCTCGCTCAAGGGGTTACCACACTGGCACTCAAATGGGCAGTGGCCATTTTGCAGAAGAAGGTTTTAGAAAAGCAGCCTATTTTAGAAACCTACAGGTTGTTGATTGGGACAATAACTTACTCCCCCTATCAAATATCCATCAGCTGGCTGACCATTCCAATTGCTATGACATAAGGGAGGGGACAAACAATGTTTGGGGAACTTACTTTTATTATGGAGGTCCTGGAAGGAATGTTAGATGTCCATGA 1485 0.4249 MDMKGYSVPWTKHKNEPFFAAHHTTRQHQCIQPNHAAPEQTSSQNHYLKLAASNSKNTIIIPMLPALVSLLLLVTSISPVLSSPVLSHSYPIANQTFRPVLHKLRRIRAHLNKINKPGVKTIQAFYFALEAVTQVLDGDLIDCVLSHHQPAFDHPVLKGQRPLDPPERPKGYYANGENVSESFQLWSDSGEACPEGTVPIRRTTEQDFLRASSIRRFGRKPRAVRRDSTATGHEHAVVFVNGDQYYGAKASINVWTPVVTDQFEFSLSQIWVIGGSFDNDLNTIEAGWQACPILHTCLKLILVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPRSVYNGRQFDIGLMVWKDPKHGHWWLEFGSGLLVGYWPAFLFSRLRSHASMVQFGGEIVNSRSRGYHTGTQMGSGHFAEEGFRKAAYFRNLQVVDWDNNLLPLSNIHQLADHSNCYDIREGTNNVWGTYFYYGGPGRNVRCP* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1588 494 Pfam Neprosin activation peptide 136 238 IPR025521 -
Dod05g1588 494 Pfam Neprosin 264 487 IPR004314 -
Dod05g1588 494 Gene3D - 256 381 - -
Dod05g1588 494 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 52 494 - -
Dod05g1588 494 PANTHER CARBOXYL-TERMINAL PEPTIDASE 52 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1588 Dod-Chr5 40992121 40995981 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1588 - - gmx:100820129 777.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1588 05 40992121 40995981 Dod05g1588 05 40992121 40995981 ECH
Dod05g1588 05 40992121 40995981 Dod09g0255 09 3780304 3784216 PCT