Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1559 ATGATGCAAGACTCAATTGGGATTCCTGCTTGCTTCTCTTCTTCTTCAGAGAAGCAGCAGGGTGATGATCATGGTGGTAGTGCTGTGACACGTTCAGGCCAAAGTGTTTACATGTCTGTGTATAGAACAAAGATAGCTGATAACTGCCGCTTGATCACAATCACCTGGTGCAAGAATCTTTTGCTTCATGGCCTATCAGTATCAGTGGAAGGCCCTGAAGGAGAAACACAGTACAGCTGCAAGGTTGAGCTAAAGCCATGGTACTTTTGGAGGAAACAAGGTTCCAAGCGCTTCATAGTAGATGGCAAAGCTGTTGACATCTTCTGGGACCTCAAAGCTGCCAGATTCAATGGGGAAACAGAACCAACCTCGGAGTACTATGTGGCAGTGGTTTGTGATGAAGAGGTTGTGCTGCTTCTCGGTGATCTCAAGAAAGATGCTTACAGAAGAACCGGGTGTAGGCCAGCACTTATTGACCCCATCTTGGTTTCAAAGAAGGAGCACATCTTTGGGAAGAAGAAGTTCTCAACTAGAGCAAAGTTCCATGAGAAAGGTAGGTGGCATGAGATCTCAATTGAGTGCAAGAGCAAGGGAAACAATGGTGGTGGTGATTCTGGAAATGGGGTTCATCAGCCAGAGATGGAGATAAGGATCGATGGGCACGTGGTGATCCATGTGAAGCACTTGCAGTGGAAGTTTAGAGGGAACGAGTCGATTCATCTCAGCAAGATGAGAGTGGAGGTATATTGGGATGTTCATGATTGGCTATTTAGTCCTGGTTTGAAGCATGCTTTGTTTATTTTTAAGCCAATTTTTTCATCTGCATCAATGTCTTTGTCATCATCATCCTCATCCTCATCGCCTCCATTATCAGCTCAGACAAGGGGTTCTGGGTCAGTGGAGGGCTTTAGTGTTAGTGGGACATCAGAGTTTTGCTTGTTTCTCTATGCTTGGAAGGTTGAATGA 966 0.4534 MMQDSIGIPACFSSSSEKQQGDDHGGSAVTRSGQSVYMSVYRTKIADNCRLITITWCKNLLLHGLSVSVEGPEGETQYSCKVELKPWYFWRKQGSKRFIVDGKAVDIFWDLKAARFNGETEPTSEYYVAVVCDEEVVLLLGDLKKDAYRRTGCRPALIDPILVSKKEHIFGKKKFSTRAKFHEKGRWHEISIECKSKGNNGGGDSGNGVHQPEMEIRIDGHVVIHVKHLQWKFRGNESIHLSKMRVEVYWDVHDWLFSPGLKHALFIFKPIFSSASMSLSSSSSSSSPPLSAQTRGSGSVEGFSVSGTSEFCLFLYAWKVE* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1559 321 Pfam Plant protein of unknown function (DUF868) 32 319 IPR008586 -
Dod05g1559 321 PANTHER OS01G0909400 PROTEIN 2 321 - -
Dod05g1559 321 PANTHER EXPRESSED PROTEIN 2 321 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1559 Dod-Chr5 40544385 40546536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1559 8 321 EF-hand Containing Proteins AT5G28150 37.460 2.34e-70 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1559 - - gmx:100779755 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1559 05 40544385 40546536 Dod09g0224 09 3368634 3369933 PCT