Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1543 ATGGTGGAGAATTTGCAGCGTTATGGAGTAATCCAATCAAGAAAGGTAGCTGAAGTAATGGAAACCATTGATAGAGGTTTGTTTGTACCCAGTGGAACCCCACCTTATGTAGACAGCCCCATGCCGATAGGCTATAATGCCACTATATCTGCACCACACATGCATGCCGCCTGCCTTCAGTTGCTGGAGCAGAATTTGCAACCTGGGATGCGTGCTCTGGACGTTGGCTCTGGAACGGGGTATCTAACATCATGTTTTGCGTTGATGGTTGGACCACAAGGCCGTGCTATTGGCGTGGAGCATATTCCTGAATTGGTTTCCTTTTCAACTGAAAATATTCAGAAAAGTGCTGCTGCTTCACTGCTGAAAGATGGTTCCCTTTCTGTACATGTTGGTGATGGGAGGCAAGGTTGGCCGGAGTCTGCTCCTTATGATGCCATCCATGTAGGAGCAGCGGCATCAGAAATTCCCCAACCACTTATTGAGCAGTTGAAGCCGGGAGGTAGAATGGTGATTCCTGTTGGAAACATATTCCAAGATTTGCAGGTTGTGGATAAGAACTCTGATGGTTCCGTCAGTATCCGCACTGAGACTTCTGTTCGTTATGTGCCTCTCACTAGTAAAGAAGCTCAACTGCGAGGTTAG 645 0.4744 MVENLQRYGVIQSRKVAEVMETIDRGLFVPSGTPPYVDSPMPIGYNATISAPHMHAACLQLLEQNLQPGMRALDVGSGTGYLTSCFALMVGPQGRAIGVEHIPELVSFSTENIQKSAAASLLKDGSLSVHVGDGRQGWPESAPYDAIHVGAAASEIPQPLIEQLKPGGRMVIPVGNIFQDLQVVDKNSDGSVSIRTETSVRYVPLTSKEAQLRG* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1543 214 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 1 209 - -
Dod05g1543 214 ProSitePatterns Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 132 147 IPR000682 GO:0004719|GO:0036211
Dod05g1543 214 TIGRFAM pimt: protein-L-isoaspartate O-methyltransferase 2 211 IPR000682 GO:0004719|GO:0036211
Dod05g1543 214 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 1 214 - -
Dod05g1543 214 Gene3D Vaccinia Virus protein VP39 1 214 IPR029063 -
Dod05g1543 214 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 1 214 IPR000682 GO:0004719|GO:0036211
Dod05g1543 214 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 185 IPR029063 -
Dod05g1543 214 CDD AdoMet_MTases 71 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1543 Dod-Chr5 40364897 40366541 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1543 K00573 - gmx:100527082 387.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1543 05 40364897 40366541 Dod05g1543 05 40364897 40366541 ECH
Dod05g1543 05 40364897 40366541 Dod09g0208 09 2862632 2865833 PCT