Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1524 ATGGAGACACTTTATGCTGGAACTGGCCTTACGGAGCCAATTAAGTTGGACCGCTATCTGCATCCACACTTTCGGTATTACATGAGGGAGGTCAGAACTGTTGTCTATTCCCAGTTTTTGGAATCTTATAAGAGTGTGACAATTGAAGCAATGGCAAAAGCCTTTGGAGTGACAATGGATTTCATTGATCTGGAGCTGTCACGTTTTATTGCAGCAGGGAAGCTTCATTGCAAGATCGATAAAGTTGCTGGAGTTCTTGAGACGAACCGCCCCGATGCTAAGAATGCTCTTTACCAAGCAACTATTAAGCAAGGGGACTTCCTATTGAACAGGATCCAGAAGTTGTCACGTGTGATTGATCTTTAG 366 0.4372 METLYAGTGLTEPIKLDRYLHPHFRYYMREVRTVVYSQFLESYKSVTIEAMAKAFGVTMDFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDAKNALYQATIKQGDFLLNRIQKLSRVIDL* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1524 121 ProSiteProfiles PCI domain profile. 1 93 IPR000717 -
Dod05g1524 121 SMART PINT_4 22 105 IPR000717 -
Dod05g1524 121 Gene3D - 4 72 - -
Dod05g1524 121 Pfam PCI domain 12 89 IPR000717 -
Dod05g1524 121 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 22 105 - -
Dod05g1524 121 PANTHER OS02G0600100 PROTEIN 6 121 - -
Dod05g1524 121 PANTHER 26S PROTESOME SUBUNIT 6 6 121 IPR019585 -
Dod05g1524 121 SUPERFAMILY "Winged helix" DNA-binding domain 17 98 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1524 Dod-Chr5 40162190 40162778 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1524 K03037 - zju:107418189 221.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1524 05 40162190 40162778 Dod05g1524 05 40162190 40162778 ECH