Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1521 ATGGAAGGGTTGGCAGTGTATGGTGGAAGCAGTGCTGCTTGTATCTCATCCTCTGTTTCACGCCCACCAACACCAACACCAACACCAACCAACAGGTTCACCATCTCCTCACAATACAGGCCTCACCAACACCAACACCTGGCAGCATTTTCTTCAAAATCCCGTCTCTTCTCATCTCACCCACTCTCTACTTCCTCTCCCTATGCCAAATCCTTCCGCGCCACATGCACCGCCACGCCCGGCATCTTCCTTCCCCACTTAATTGCTTCTCTGGAACAGGTTGACCAAACCTACATAATGGTGAAGCCCGATGGTGTCCAACGTGGCCTCGTGGGAGAAATTATTTCTAGGTTTGAGAAGAAGGGTTTTAAGTTAACTGGTTTGAAGCTCTTCCAGTGCACAAAAGAATTAGCTGAGGTTTGTGCTCGCTGCAATACTTGCTTGTATGTGCTATATCATGTGTTCACTGAGCATTACAAGGACCTAAAAGGAAAGTCATTCTTCCCCAAGCTGATTGACTATATTACTTCTGGTCCTGTTGTGTGTATGGCTTGGGAGGGTGTTGGAGTAGTGGCATCAGCACGCAAGCTTATAGGGGCTACAGATCCTCTTCTAGCTGAACCAGGCACAATAAGAGGAGATCTTGCTGTTCAGACAGGAAGGAATATTGTTCATGGCAGTGACAGCCCTGAGAATGGCAAGCGTGAAATAGGTAAGGCGTTTTGTGCTATCGAGTTTAACCCAGATGCTTGCAACAAAAATGACATGTGA 771 0.4734 MEGLAVYGGSSAACISSSVSRPPTPTPTPTNRFTISSQYRPHQHQHLAAFSSKSRLFSSHPLSTSSPYAKSFRATCTATPGIFLPHLIASLEQVDQTYIMVKPDGVQRGLVGEIISRFEKKGFKLTGLKLFQCTKELAEVCARCNTCLYVLYHVFTEHYKDLKGKSFFPKLIDYITSGPVVCMAWEGVGVVASARKLIGATDPLLAEPGTIRGDLAVQTGRNIVHGSDSPENGKREIGKAFCAIEFNPDACNKNDM* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1521 256 ProSitePatterns Nucleoside diphosphate kinases active site. 222 230 IPR023005 -
Dod05g1521 256 Pfam Nucleoside diphosphate kinase 96 139 IPR034907 -
Dod05g1521 256 Pfam Nucleoside diphosphate kinase 155 242 IPR034907 -
Dod05g1521 256 PANTHER NUCLEOSIDE DIPHOSPHATE KINASE 1 242 - -
Dod05g1521 256 Gene3D - 90 253 IPR036850 -
Dod05g1521 256 SUPERFAMILY Nucleoside diphosphate kinase, NDK 95 246 IPR036850 -
Dod05g1521 256 Hamap Nucleoside diphosphate kinase [ndk]. 94 246 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Dod05g1521 256 SMART ndk_5 94 248 IPR034907 -
Dod05g1521 256 CDD NDPk_I 96 238 - -
Dod05g1521 256 PANTHER NUCLEOSIDE DIPHOSPHATE KINASE 1 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1521 Dod-Chr5 40140102 40142588 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1521 K00940 - gmx:100500478 286.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1521 05 40140102 40142588 Dod05g1521 05 40140102 40142588 ECH
Dod05g1521 05 40140102 40142588 Dod02g0012 02 374450 379938 PCT