Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1514 ATGGATCTTGGAACCGATGGCTATCCCAAACCAGCAGTGAAAAAGATTGATTCCCACTATGATGTGCCAGAAGGAGTGGACATTCGGGGAAGATACGATGAAGAGTTTGCAAAGATTCTCACAAAGGATGCTTTGAAATTCGTTGCTGACCTTCAACGTGAGTTCAGGAACCATATAAGGTATGCATTAGAGTGCAGAAAAGAAGCAAAGAGGAGGTACAATGAAGGTGCTCTACCAGGGTTTGATACAGCCACCAGGCACATAAGGGAAGGAGAGTGGGTGTGTGCACCTGTTCCACCACCCGTTGCTGATAGGAAGGTGGAGATCACAGGCCCTGTTGAGAGAAAGATGATCATCAATGCTCTCAACTCTGGAGCTAAAGTCTTCATGGCTGATTTTGAAGATGCACTCTCACCCAGCTGGGAGAATCTGATGAGGGGCCAAGTGAACCTGAAGGATGCTGTGGCCGGGACAATAAGCTTCCATGACAAAGGCAGGAACAGGGTTTACAAGCTCAATGATCAGACGGCAAAGCTTTTTGTCAGAGCAAGAGGCTGGCACCTACCCGAGGCCCACATCCTGATTGATGGTGAACCTGCAACTGGTTGCCTTGTTGATTTTGGCCTCTACTTCTACCACAATCATGCAACATTCCGCCGTACTCAAGGTGCTGGGTTTGGCCCTTTCTTCTATCTTCCAAAAATGGAGCACTCGAGGGAGGCTAAGATATGGAACAATGTGTTCGAGAGGGCAGAGAGGATAGCAGGCATAGAAATAGGAAGCATCAGGGCCACTGTTCTGATTGAAACACTTCCTGCGGTGTTCCAAATGGATGAAATTCTGTATGAGCTGAGGGATCACTCCGTGGGCCTCAACTGTGGGCGTTGGGATTACATTTTCAGTTATGTGAAGACCTTCCAGGCTCACCCAGATCGGCTGCTACCAGACAGGGTCCAGGTTGGAATGACTCAGCACTTCATGAAGAGCTACTCCGATCTTCTCATCAGGACTTGCCATAGGCGCTGTGTCCATGCTATGGGAGGCATGGCAGCTCAGATTCCAATCAGAGATGATCCTGCGGCTAATGAGGCTGCACTGGAACTGGTAAGGAAGGACAAGCTAAGAGAAGTGAAGGCAGGGCATGATGGCACCTGGGCAGCACACCCTGGCCTAATCCCAGCCTGCATGGAGGTTTTCAACAACATCATGGGCAATGCTCCTAATCAGATAAACACGGCGAAACGCGATGATGCCATGAGCTTAACTGAGGAAGACCTCTTGCAGATACCTAGAGGAGTTCGTACCATGGAAGGTCTCCGCCTGAACACAAGGGTGGGTATTCAGTATGTGGCAGCTTGGCTAACTGGAGCTGGTTCAGTGCCTCTTTACAACCTCATGGAAGATGCAGCCACTGCTGAGATCAGCAGGGTGCAGAACTGGCAGTGGCTGAAGTATGGTGTGGAGTTGGATGGGGATGGACTTGGTGTGAGAGTGAGCAAAGAACTCTTTGGCAGAGTGGTTGAGGAAGAAATGGCTAGGATTGAAAGAGAGGTGGGAAAAGAGAAGTTCAAGAAGGGAATGTACAAGGAGGCTTGCAAGATCTTCACCCGGCAATGCACAGCACCAACACTGGATGATTTTCTGACCCTGGACGCCTATGATCATGTAGTCATACATCACCTCAGCGGACCATCAAGCCTTTAA 1704 0.4953 MDLGTDGYPKPAVKKIDSHYDVPEGVDIRGRYDEEFAKILTKDALKFVADLQREFRNHIRYALECRKEAKRRYNEGALPGFDTATRHIREGEWVCAPVPPPVADRKVEITGPVERKMIINALNSGAKVFMADFEDALSPSWENLMRGQVNLKDAVAGTISFHDKGRNRVYKLNDQTAKLFVRARGWHLPEAHILIDGEPATGCLVDFGLYFYHNHATFRRTQGAGFGPFFYLPKMEHSREAKIWNNVFERAERIAGIEIGSIRATVLIETLPAVFQMDEILYELRDHSVGLNCGRWDYIFSYVKTFQAHPDRLLPDRVQVGMTQHFMKSYSDLLIRTCHRRCVHAMGGMAAQIPIRDDPAANEAALELVRKDKLREVKAGHDGTWAAHPGLIPACMEVFNNIMGNAPNQINTAKRDDAMSLTEEDLLQIPRGVRTMEGLRLNTRVGIQYVAAWLTGAGSVPLYNLMEDAATAEISRVQNWQWLKYGVELDGDGLGVRVSKELFGRVVEEEMARIEREVGKEKFKKGMYKEACKIFTRQCTAPTLDDFLTLDAYDHVVIHHLSGPSSL* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1514 567 Pfam Malate synthase 27 557 IPR001465 GO:0004474|GO:0006097
Dod05g1514 567 TIGRFAM malate_syn_A: malate synthase A 39 556 IPR006252 GO:0004474|GO:0006097
Dod05g1514 567 PANTHER MALATE SYNTHASE 19 566 IPR006252 GO:0004474|GO:0006097
Dod05g1514 567 PIRSF Malate_synth 17 558 IPR006252 GO:0004474|GO:0006097
Dod05g1514 567 Gene3D Malate synthase, domain 3 22 432 IPR046363 -
Dod05g1514 567 Gene3D Malate synthase, domain III 433 557 IPR044856 -
Dod05g1514 567 SUPERFAMILY Malate synthase G 22 557 IPR011076 GO:0003824
Dod05g1514 567 ProSitePatterns Malate synthase signature. 285 300 IPR019830 GO:0004474|GO:0006097
Dod05g1514 567 PANTHER MALATE SYNTHASE 19 566 - -
Dod05g1514 567 CDD malate_synt_A 39 557 IPR006252 GO:0004474|GO:0006097
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1514 K01638 - gmx:732628 1044.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1514 05 40046266 40050007 Dod05g1514 05 40046266 40050007 ECH