LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod05g1513	ATGAGGATCCCTAATTTGGCTATTCACTTGGACAGGAATGTTAATACTGATGGATTCAAAGCCAACACTCAGTCTCATGTTCTTCCCATCTTGGCTACATCAGTGAAGGCAGAGCTCAATAAAGTGGTCTCTGAAAGTGGAAAGAAGTCAAATGATAAAGTTCACACTAACAATACTAAACACCATTCTCTTCTCCTGCAGTTGCTTGCCAGCAAGCTTGGTTGTGAAACAGATGACATTTGTGATTTTGAATTGCAAGCTTGTGATACCCAGCCAAGTGTAATTGCTGGAGCTGCCAAGGAATTCATATTTTCAGGACGGCTTGATAACTTGTGCATGTCATTTTGCTCATTGAAGGCATTGATAGATGCTACATCCTCTGAAAGCAGTCTTGAGGAAGAGACTGGCGTTAGAATGGTGGCTTTGTTTGACCATGAGGAATGCGGATCTGATTCTGCACAAGGAGCTGGCTCTCCTGTCATGCTAAATGCTTTATCTCGGGTTACAAATTCCTTTAGCTCAGATTCCAAGATGCTTGAGAAAGCAATACCAAGAAGCTTCCTTGTTTCTGCTGATATGGCGCATGCACTACACCCCAATTACATGGACAAACATGAAGAAAACCATCAGCCTAAACTACACGGAGGACTTGTCATTAAACACAATGCAAATCAACGATATGCAACCAATGCCGTCACATCCTTCATATTCAGGGAGATAGCATCAATACATAACCTTCCCATTCAGGACTTTGTGGTGCGTAATGACATGCCTTGTGGTTCAACTATTGGTCCCATCCTTGCAAGTGGCGTGGGCATTCGTACAGTTGATGTGGGTGCACCTCAGTTGTCAATGCATAGCATACGAGAAATGTGTGCTGTTGATGATGTCAAGCACTCATATGAGCATTTCAAGGCCTTTTTCCAGGAGTTCTCTCATCTCGATGCAAAGATTGTCGTGGACTCATAG	969	0.4314	MRIPNLAIHLDRNVNTDGFKANTQSHVLPILATSVKAELNKVVSESGKKSNDKVHTNNTKHHSLLLQLLASKLGCETDDICDFELQACDTQPSVIAGAAKEFIFSGRLDNLCMSFCSLKALIDATSSESSLEEETGVRMVALFDHEECGSDSAQGAGSPVMLNALSRVTNSFSSDSKMLEKAIPRSFLVSADMAHALHPNYMDKHEENHQPKLHGGLVIKHNANQRYATNAVTSFIFREIASIHNLPIQDFVVRNDMPCGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQEFSHLDAKIVVDS*	323

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod05g1513	322	PANTHER	ASPARTYL AMINOPEPTIDASE	1	321	-	-
	Dod05g1513	322	PRINTS	Aminopeptidase I zinc metalloprotease (M18) signature	275	290	IPR001948	GO:0004177\|GO:0006508\|GO:0008270
	Dod05g1513	322	PRINTS	Aminopeptidase I zinc metalloprotease (M18) signature	143	161	IPR001948	GO:0004177\|GO:0006508\|GO:0008270
	Dod05g1513	322	PRINTS	Aminopeptidase I zinc metalloprotease (M18) signature	186	202	IPR001948	GO:0004177\|GO:0006508\|GO:0008270
	Dod05g1513	322	SUPERFAMILY	Zn-dependent exopeptidases	81	309	-	-
	Dod05g1513	322	PANTHER	ASPARTYL AMINOPEPTIDASE	1	321	IPR001948	GO:0004177\|GO:0006508\|GO:0008270
	Dod05g1513	322	SUPERFAMILY	Aminopeptidase/glucanase lid domain	1	86	-	-
	Dod05g1513	322	Pfam	Aminopeptidase I zinc metalloprotease (M18)	1	308	IPR001948	GO:0004177\|GO:0006508\|GO:0008270
	Dod05g1513	322	Gene3D	Zn peptidases	20	321	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod05g1513	Dod-Chr5	40041681	40045604	Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod05g1513	K01267		-	csin:114316155	538.495

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dod05g1513	05	40041681	40045604	Dod05g1513	05	40041681	40045604	ECH