Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1509 ATGGCGCTTTTCCTTCTGTACGAGTCGGCTTCGGGTTACGCCCTGTTGGAGGCTCACGGCCTCGACGAAATCGGCCACAACACCGAAGCTGTTCGGAGCTCCGTTTCCGACCTCAACCGCTTCGGCAAGGTCGTCAGGCTCCGCTCCTTCAACCCCTTCACCTCTGCCCTCGATGCCCTCAAACAGTGCAACGCAGTCTCCGAAGGCATATTGACTGATGAGCTGAGGACTGTTTTGGAGACTAACTTGCCTAAAGTCAAGGAAGGTAAGAAGGCCAAGTTCAGTTTGGGTGTTTCGGATCCTAAGATTGGTTCCCAGATATCCGAAGTGACCAGAATTCCTTGCCAAAGTGATGACTTTGTGAATGAGCTGCTCCGTGGTGTAAGGCTCCATTTTGATAGGTTTGTTGGTGATCTCAAGACTGGAGATTTGGAAAAGGCACAGCTTGGTCTGGGGCATAGTTACAGCAGAGCCAAGGTGAAATTCAATGTTAATCGAGTTGACAATATGGTTATTCAAGCAATCTTCCTTCTCGATACGCTTGATAAAGATATCAATTCATTCTCCATGAGAGTAAGAGAATGGTATTCGTGGCATTTTCCTGAACTGGGGAAGATTGTGAATGACAACTATCTGTATGCAAAAGTTGCGAAATTTATTGAGGATAAAGCAAAGTTGTCCGAGGACAGGATTCCGGACTTAACTGACATAGTTGGAGATGAAGATAAAGCAAAGGAGATTGTGGAAGCTGCCAAGGCCTCCATGGGACAGGATTTATCCCCAGTGGACTTGATTAATGTCCAGCAATTTGCACAGAGGGTAATGGACCTATCTGAGTATAGGCGGAAGCTATATGATTACCTGGTTGCTAAAATGAATGACATTGCCCCAAATTTGACCTCTTTAATTGGTGAAGTTGTTGGTGCACGTTTAATATCTCATGCTGGTAGTCTCACAAATTTGGCTAAGTGCCCCTCTTCAACTCTTCAAATTCTTGGTGCTGAGAAGGCTTTGTTCAGGGCATTAAAAACCAGAGGAAACACTCCCAAATATGGTCTGATATTCCACTCCTCATTTATTGGTCGAGCATCTGCCAGAAATAAGGGCCGAATGGCTCGTTATCTTGCAAACAAATGTTCAATTGCATCACGGATTGACTGCTTTTCTGAAAGGGGTACAACTACTTTTGGGGAGAAACTCCGTGAGCAAGTTGAGGAGCGACTTGACTTTTATGACAAGGGAGTTGCCCCACGTAAAAACATAGATGTCATGAAGTCTGCTATTGAGAGTGCCACAAACAAAGAAACAGAGATGGAAACAGAAGAAGTGCCCGTTGAAGCTTCAGGCAAGAAATCCAAGAAGAAGAAGAAGCAAAAAGTTGCTGCCAATGATGGTGACGAAATGGCTATAGATAAGACCACAGAAATTACAAATGGTGATGGCCCGAAGGATCATAAGTCGGAAAAGAAGAAGAAAAAGAAAGAAAAGAGGAAATTGGACCAGGAGATGGAGCTTGATGATCAGGCAGTAGATGATGGTGCCAATGGGGTTGCCAATGAGCAAGATGGAGCGGTTAAAAAGAAGAAGAAGAAGGAGGAGGAGGATAAAAGGGATGATGATGGGCAAGTACCGGAGGCTGTCAGTGAGACTAAGAAGAAGAAGAAAAAGAAATCAAAAAGTAAGGATGCGGAGTAA 1695 0.4472 MALFLLYESASGYALLEAHGLDEIGHNTEAVRSSVSDLNRFGKVVRLRSFNPFTSALDALKQCNAVSEGILTDELRTVLETNLPKVKEGKKAKFSLGVSDPKIGSQISEVTRIPCQSDDFVNELLRGVRLHFDRFVGDLKTGDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDINSFSMRVREWYSWHFPELGKIVNDNYLYAKVAKFIEDKAKLSEDRIPDLTDIVGDEDKAKEIVEAAKASMGQDLSPVDLINVQQFAQRVMDLSEYRRKLYDYLVAKMNDIAPNLTSLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFSERGTTTFGEKLREQVEERLDFYDKGVAPRKNIDVMKSAIESATNKETEMETEEVPVEASGKKSKKKKKQKVAANDGDEMAIDKTTEITNGDGPKDHKSEKKKKKKEKRKLDQEMELDDQAVDDGANGVANEQDGAVKKKKKKEEEDKRDDDGQVPEAVSETKKKKKKKSKSKDAE* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1509 564 MobiDBLite consensus disorder prediction 432 449 - -
Dod05g1509 564 MobiDBLite consensus disorder prediction 459 486 - -
Dod05g1509 564 MobiDBLite consensus disorder prediction 431 564 - -
Dod05g1509 564 Gene3D - 140 298 - -
Dod05g1509 564 SUPERFAMILY Nop domain 163 412 IPR036070 -
Dod05g1509 564 MobiDBLite consensus disorder prediction 522 551 - -
Dod05g1509 564 PANTHER NOP56-LIKE PRE RNA PROCESSING RIBONUCLEOPROTEIN 1 497 - -
Dod05g1509 564 SMART NOSIC_2 170 222 IPR012976 -
Dod05g1509 564 Pfam NOP5NT (NUC127) domain 4 69 IPR012974 -
Dod05g1509 564 Pfam snoRNA binding domain, fibrillarin 177 409 IPR002687 -
Dod05g1509 564 PANTHER NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 1 497 IPR045056 GO:0030515|GO:0031428|GO:0032040
Dod05g1509 564 Gene3D Nop domain 299 423 IPR042239 -
Dod05g1509 564 ProSiteProfiles Nop domain profile. 295 413 IPR002687 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1509 Dod-Chr5 40010023 40013156 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1509 K14564 - gmx:100779446 902.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1509 05 40010023 40013156 Dod05g1509 05 40010023 40013156 ECH