Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1490 ATGAACTCTCGCGAGGCTAGCCTTGTGGCCACCGCTACCGTGTTTGGTGCACTGGCCTCCGCAATTGCTATCCGCTTCTTCTACCGCTCCCAAAACCAAAACCAAAACCACTCCCGAAACGGCACCGTATCCCACAACAGCTCTTTACGTGACCCTTTCGATCCCTCCAAGCGCAAAGGGTACTTGTCGTGGGATGACTATTTCATGGCAATTGCGTTTTTGTCTGCTGAAAGATCCAAGGACCCTAACAGGCAGGTAGGGGCTTGCTTGGTGAGTCAAGATGGTATAATTCTTGGTATTGGTTATAACGGATTTCCAAGAGGTTGTTCTGATGACAAGCTACCATGGGCTAAGAAATCTAGGACTGGGGATCCTTTGGAGACAAAGTACCCTTATGTTTGTCATGCAGAAGTTAATGCTATTCTTAACACAAATCATGCCTCTGCTGCTGGACAACGGCTATATGTGACCATGTTTCCATGCAACGAATGTGCTAAGATCATAATCCAGTCAGGAGTTTCTGAAGTCATTTATTTTGTGGAGAAGAGGTTAGAAAATTCAGATAATATATATATTGCTTCGCACAAGCTACTTTCATTGGCCGGTGTGAAGGTCAGAAAACATCAACCACTAATGGATGGAATTCATCTTAGCAAGCCGTAA 663 0.451 MNSREASLVATATVFGALASAIAIRFFYRSQNQNQNHSRNGTVSHNSSLRDPFDPSKRKGYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQDGIILGIGYNGFPRGCSDDKLPWAKKSRTGDPLETKYPYVCHAEVNAILNTNHASAAGQRLYVTMFPCNECAKIIIQSGVSEVIYFVEKRLENSDNIYIASHKLLSLAGVKVRKHQPLMDGIHLSKP* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1490 220 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 63 179 IPR002125 -
Dod05g1490 220 CDD deoxycytidylate_deaminase 65 178 IPR035105 -
Dod05g1490 220 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 63 205 IPR002125 -
Dod05g1490 220 Gene3D Cytidine Deaminase, domain 2 55 219 - -
Dod05g1490 220 SUPERFAMILY Cytidine deaminase-like 65 209 IPR016193 GO:0003824
Dod05g1490 220 PANTHER DEOXYCYTIDYLATE DEAMINASE-RELATED 1 217 IPR015517 -
Dod05g1490 220 PANTHER CYTIDINE/DEOXYCYTIDYLATE DEAMINASE FAMILY PROTEIN 1 217 - -
Dod05g1490 220 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 135 168 IPR016192 GO:0008270|GO:0016787
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1490 K01493 - gmx:100792003 377.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1490 05 39769040 39772601 Dod05g1490 05 39769040 39772601 ECH